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Registros recuperados: 17
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Allele- and parent-of-origin-specific effects on expression of the KCNJ11 gene: a candidate for meat tenderness in cattle. Repositório Alice
SOUZA, M. M. de; NICIURA, S. C. M.; TIZIOTO, P. C.; IBELLI, A. M. G.; GASPARIN, G.; ROCHA, M. I. P.; DONATONI, F. A. B.; MALAGO JUNIOR, W.; DINIZ, W. J. S.; OLIVEIRA, P. S. N. de; LIMA, A. O.; MUDADU, M. de A.; BARIONI JUNIOR, W.; COUTINHO, L. L.; REGITANO, L. C. de A..
Tipo: Artigo de periódico Palavras-chave: Nelore; Expressão alélica diferencial; Maciez da carne; Gado Nelore; Alleles.
Ano: 2016 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1052240
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Detection of quantitative trait loci for leaf chlorophyll content at maximum tillering International Rice Research Institute
Dong, Y. J.; Ogawa, T.; Lin, D. Z.; Kamiunten, H.; Terao, H.; Matsuo, H..
p.16-17
Palavras-chave: Quantitative trait loci; Leaves; Chlorophyll; Tillering; Inbred rice; Alleles; Segregation; Gene mapping; Genetic markers.
Ano: 2005 URL: http://hdl.handle.net/123456789/1095
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Différenciation génétique de quelques populations Tunisiennes d'Artemia leach, 1819 (crustacé, branchiopode) OceanDocs
Ghlala., A.; Charfi-Cheikhrouha., F..
L’analyse du polymorphisme isoenzymatique de 5 populations d’Artemia de Tunisie a été entreprise afin d’évaluer les ressources génétiques de cette espèce et d’estimer la variabilité génétique intra et interpopulationnelle. Cette analyse a été effectuée sur la base de 5 systèmes enzymatiques et 11 loci dont 7 sont polymorphes : PEP3, PEP4, IDH1, IDH2, MDH1, MDH2 et APH. Parmi ces loci, l’IDH2 et la MDH1 peuvent être considérés comme des loci diagnostiques. Les paramètres de diversité génétique estimés pour l’hétérozygotie observée, le taux de polymorphisme et le nombre moyen d’allèles par locus sont de 0.051 à 0.364, de 36.4% à 45.5% et de 1.3 à 1.7 respectivement. Les valeurs des distances génétiques de Nei (1978), calculées à partir des fréquences...
Tipo: Journal Contribution Palavras-chave: Alleles; Biopolymorphism; Biopolymorphism; Population genetics; Statistical tables; Variability; Alleles; Population genetics; Http://aims.fao.org/aos/agrovoc/c_8724; Http://aims.fao.org/aos/agrovoc/c_34326.
Ano: 2008 URL: http://hdl.handle.net/1834/4233
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Fine mapping of anthracnose resistance allele Co-14 in the common bean cultivar and 277. Repositório Alice
LIMA, L. R. L.; GONÇALVES-VIDIGAL, M. C.; VAZ BISNETA, M.; VALENTINI, G.; VIDIGAL FILHO, P. S.; MARTINS, V. R.; SOUZA, T. L. P. O..
The objectives of this study were to fine-map the anthracnose-resistance locus in AND 277 and to identify DNA markers tightly linked to the Co-14 allele, previously mapped on Pv01.
Tipo: Artigo de periódico Palavras-chave: Feijão; Phaseolus Vulgaris; Antracnose; Colletotrichum Lindemuthianum; Beans; Alleles; Anthracnose.
Ano: 2021 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1132712
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Finger Millet Genetic Male-sterile Line INFM 95001 Open Agri
Palavras-chave: Self pollination; Alleles; Heterosis; Segregation; Millets; Threshing; Crossing over; Sexual reproduction; Grain; Breeds (animals).
Ano: 1997 URL: http://agropedia.iitk.ac.in/openaccess/?q=node/3879
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Genetic diversity of arboreal cotton populations of the Brazilian semiarid: a remnant primary gene pool for cotton cultivars. Repositório Alice
MENEZES, I. P. P. de; HOFFMANN, L. V.; LIMA, T. H. de; SILVA, A. R. da; LUCENA, V. S.; BARROSO, P. A. V..
Mocó cotton belong to the same species as the cultivated species, Gossypium hirsutum, and cultivated forms were mainly landraces but also developed as cultivars, bearing good fiber quality and drought tolerant when cropped as a perennial species. The northeast Brazil crop system based on this cotton type is finished, with a few small area planted in the three main States, where it was previously cultivated (Ceará, Paraíba, and Rio Grande do Norte), but in others, maintenance is accomplished by single dooryard plants. Plants were found in all visited Northeast Brazil municipalities, sometimes in the North of the country, and were collected for ex situ preservation and evaluation. Most of seeds had no fuzz (62.2%) and 94.6% of the genotypes presented spot in...
Tipo: Artigo de periódico Palavras-chave: Alelo; Genetic diversity.; Algodão; Germoplasma.; Gossypium hirsutum; Genótipo; Fibra; Cotton; Germplasm.; Genotype; Alleles.
Ano: 2017 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1082821
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Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.) Open Agri
Upadhyaya, H.D..
Palavras-chave: Alleles; Chickpeas; Locus; Genomes; Polymorphism; Genes; Genetic structures; DNA; PCR; Peas.
Ano: 2008 URL: http://agropedia.iitk.ac.in/openaccess/?q=node/3334
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Genetic variability of 10 microsatellite markers in the characterization of Brazilian Nellore cattle (Bos indicus) Genet. Mol. Biol.
Cervini,Marcelo; Henrique-Silva,Flávio; Mortari,Norma; Matheucci Jr,Euclides.
We assessed the polymorphism of 10 microsatellites in Brazilian Nellore cattle (Bos indicus) using a commercial multiplex system. Allele frequencies, polymorphism information content, heterozygosity and exclusion probability were calculated. Allele frequencies revealed that in the sample analyzed the markers were not equally polymorphic. The exclusion probabilities and the polymorphism information content of some loci in Nellore cattle were lower than in Bos taurus breeds. When all the microsatellites were considered the combined exclusion probability was 0.9989. This multiplex analysis can contribute toward pedigree information, adequate genetic improvements and breeding programs.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Alleles; Frequencies; Microsatellite; Nellore; Polymorphism; Zebu.
Ano: 2006 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000300015
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Genome wide association analysis for birth and weaning weight in Canchim beef cattle. Repositório Alice
BUZANSKAS, M. E.; GROSSI, D. A.; SCHENKEL, D. A.; VENTURA, R.; REGITANO, L. C. de A.; ALENCAR, M. M. de; MUNARI, D. P..
Tipo: Separatas Palavras-chave: Genomic selection; SNP.; Alleles; Beef cattle; Genes..
Ano: 2013 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/963172
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ICGL 1, ICGL 2, ICGL 3, ICGL 4, and ICGL 5 nonnodulating groundnut germplasm lines Open Agri
Palavras-chave: Root nodulation; Genotypes; Genes; Recessive genes; Groundnuts; Alleles; Humus; Nitrogen fixation; Proteins; Plant habit.
Ano: 1992 URL: http://agropedia.iitk.ac.in/openaccess/?q=node/3832
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Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea) Open Agri
Luu M Cuc.
Palavras-chave: Genomes; Genetic structures; Polymorphism; Alleles; DNA; Genotypes; PCR; Cloning; Locus; Groundnuts.
Ano: 2008 URL: http://agropedia.iitk.ac.in/openaccess/?q=node/3317
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Linkage disequilibrium analysis in Canchim beef cattle. Repositório Alice
BUZANSKAS, M. E.; GROSSI, D. A.; SCHENKEL, D. A.; VENTURA, R.; REGITANO, L. C. de A.; ALENCAR, M. M. de; MUNARI, D. P.
Tipo: Separatas Palavras-chave: Autosome; Genomic selection; SNP; Synthetic breed; Alleles.
Ano: 2013 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/963184
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New high-sensitive rhAmp method for A1 allele detection in A2 milk samples. Repositório Alice
GIGLIOTI, R.; GUTMANIS, G.; KATIKI, L. M.; OKINO, C. H.; OLIVEIRA, M. C. de S.; VERCESI FILHO, A. E..
Cows milk may contain two types of - casein: A1 and A2. A1 digestion is associated with the release of - casomorphine-7 peptide, which can cause adverse gastrointestinal effects. Two methods high-resolution melting (HRM) and rhAmp® SNP genotyping - were developed to identify the - casein gene (CSN2) A1 and A2 alleles directly in milk. DNA milk samples from 45 animals were examined and 10 samples were also sequenced to confirm the accuracy of the assays. The analytical sensitivities of both strategies for A1 allele identification were evaluated by testing decreasing dilutions of A1 allele DNA copies (500 - 5 copies) in the A2 sample. The limits of detection for A1 in A2 samples were 10% (100 copies) and 2% (10 copies) for HRM and rhAmp, respectively. Both...
Tipo: Artigo de periódico Palavras-chave: B casein; HRM; RhAmp; Genotyping; Alleles.
Ano: 2020 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1121088
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Novel LNA probe-based assay for the A1 and A2 identification ofB-casein gene in milk samples. Repositório Alice
OLIVEIRA, M. C. de S.; KATIKI, L. M.; GIGLIOTI, R.; OKINO, C. H.; AZEVEDO, B. T.; GUTMANIS, G.; VERCESI FILHO, A. E..
The rising consumption of A2 milk and its derivatives in recent years has garnered attention from both consumers and producers, mainly due its possible health benefits, such as enhanced digestion and easier absorption. Thus, a novel real-time PCR using a combination of locked nucleic acid modified (LNA) conjugated probes was developed to genotype A1 and A2 alleles of B-casein gene (CSN2) and to detect and quantify the A1 presence in A2 samples. The limit of detection for each probe (A1 and A2) was evaluated using decreasing serial dilutions. Besides, the sensitivity of A1 allele detection in the A2 samples was also tested. The limits of detection of A1 and A2 alleles were 6 copies, while for A1 allele detection in A2 samples was 7.5 copies (1%). The...
Tipo: Artigo de periódico Palavras-chave: B Casein; Sensitivity; LNA probe; Real time PCR; Alleles.
Ano: 2021 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1137153
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Open access resources for genome-wide association mapping in rice. Repositório Alice
MCCOUCH, S. R.; WRIGHT, M. H.; TUNG, C.-W.; MARON, L. G.; MCNALLY, K. L.; FITZGERALD, M.; DECLERCK, G.; AGOSTO-PEREZ, F.; KORNILIEV, P.; GREENBERG, A. J.; NAREDO, M. E. B.; MERCADO, S. M. Q.; HARRINGTON, S. E.; SHI, Y.; BRANCHINI, D. A.; FALCAO, P. R. K.; LEUNG, H.; EBANA, K.; YANO, M.; EIZENGA, G.; SINGH, N.; MCCLUNG, A.; MEZEY, J..
Increasing food production is essential to meet the demands of a growing human population, with its rising income levels and nutritional expectations. To address the demand, plant breeders seek new sources of genetic variation to enhance the productivity, sustainability and resilience of crop varieties. Here we launch a high-resolution, open-access research platform to facilitate genome-wide association mapping in rice, a staple food crop. The platform provides an immortal collection of diverse germplasm, a high-density single-nucleotide polymorphism data set tailored for gene discovery, well-documented analytical strategies, and a suite of bioinformatics resources to facilitate biological interpretation. Using grain length, we demonstrate the power and...
Tipo: Artigo de periódico Palavras-chave: Dados genótipicos; Biologia computacional.; Genoma; Genome; Chromosome mapping; Genetic resources; Alleles; Genetic improvement; Bioinformatics; Genes..
Ano: 2016 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1068128
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Report of new alleles at BG loci in Camperos chickens JBAG
Iglesias,G. M; Huguet,M. J; Goto,R. M.; Miquel,M. C; Miller,M. M.
Camperos are meat-type chickens developed in Argentina that are under study for their response to disease. Nine new alleles were found in Campero chickens (from INTA EEA Pergamino) at the highly polymorphic BG loci within the Major Histocompatibility Complex (MHC), and were later reported to the GenBank (Accession numbers: DQ17443, DQ174444, DQ176443-DQ6449). All of them vary from previously reported BG alleles obtained from white Leghorn chickens and the Red Jungle Fowl from the Chicken Genome Project. Animals were selected from line-crossing among Plymouth Rock Red, Rhode Island Red and Cornish Red. Sequences reported add further evidence about the extreme diversity of these highly polymorphic, rapidly-evolving MHC genes.
Tipo: Info:eu-repo/semantics/article Palavras-chave: MHC; BG genes; Alleles; Camperos chickens.
Ano: 2007 URL: http://www.scielo.org.ar/scielo.php?script=sci_arttext&pid=S1852-62332007000100006
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Stably expressed QTLs for grain shape in rice grown in two Asian countries International Rice Research Institute
Dong, Y. J.; Xiao, K.; Zuo, H. L.; Matsuo, M..
p.47-48
Tipo: Article Palavras-chave: Alleles; Chromosomes; Chromosome maps; Gene expression; Inbred lines; Inheritance; Quantitative trait loci; Seeds; Seed wieght; Segregation; Traits; Transgression.
Ano: 2006 URL: http://hdl.handle.net/10269/130
Registros recuperados: 17
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