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Coupling spectral analysis and hidden Markov models for the segmentation of behavioural patterns 5
Heerah, Karine; Woillez, Mathieu; Fablet, Ronan; Garren, Francois; Martin, Stephane; De Pontual, Helene.
Background Movement pattern variations are reflective of behavioural switches, likely associated with different life history traits in response to the animals’ abiotic and biotic environment. Detecting these can provide rich information on the underlying processes driving animal movement patterns. However, extracting these signals from movement time series, requires tools that objectively extract, describe and quantify these behaviours. The inference of behavioural modes from movement patterns has been mainly addressed through hidden Markov models. Until now, the metrics implemented in these models did not allow to characterize cyclic patterns directly from the raw time series. To address these challenges, we developed an approach to i) extract new metrics...
Tipo: Text Palavras-chave: Fourier transform; Non negative matrix factorization; Classification; Animal behaviour; European sea bass; Movement ecology; Diurnal and tidal cycles; Biologging; Data storage tags.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00402/51400/51974.pdf
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High inter‐ and intraspecific niche overlap among three sympatrically breeding, closely‐related seabird species: Generalist foraging as an adaptation to a highly variable environment? 5
Dehnhard, Nina; Achurch, Helen; Clarke, Judy; Michel, Loic; Southwell, Colin; Sumner, Michael D.; Eens, Marcel; Emmerson, Louise.
1.Ecological niche theory predicts sympatric species to show segregation in their spatio‐temporal habitat utilization or diet as a strategy to avoid competition. Similarly, within species individuals may specialise on specific dietary resources or foraging habitats. Such individual specialisation seems to occur particularly in environments with predictable resource distribution and limited environmental variability. Still little is known about how seasonal environmental variability affects segregation of resources within species and between closely related sympatric species. 2.The aim of the study was to investigate the foraging behaviour of three closely related and sympatrically breeding fulmarine petrels (Antarctic petrels Thalassoica antarctica, cape...
Tipo: Text Palavras-chave: Antarctica; Biologging; Expectation-Maximization binary Clustering (EMbC); Fulmarine petrel; Generalized additive model (GAM); Kernel distribution; Model cross-validation; Stable isotope analysis.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00509/62056/66218.pdf
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Impact of Tropical Cyclones on Inhabited Areas of the SWIO Basin at Present and Future Horizons. Part 1: Overview and Observing Component of the Research Project RENOVRISK-CYCLONE 5
Bousquet, Olivier; Barruol, Guilhem; Cordier, Emmanuel; Barthe, Christelle; Bielli, Soline; Calmer, Radiance; Rindraharisaona, Elisa; Roberts, Gregory; Tulet, Pierre; Amelie, Vincent; Fleischer-dogley, Frauke; Mavume, Alberto; Zucule, Jonas; Zakariasy, Lova; Razafindradina, Bruno; Bonnardot, François; Singh, Manvendra; Lees, Edouard; Durand, Jonathan; Mekies, Dominique; Claeys, Marine; Pianezze, Joris; Thompson, Callum; Tsai, Chia-lun; Husson, Romain; Mouche, Alexis; Ciccione, Stephane; Cattiaux, Julien; Chauvin, Fabrice; Marquestaut, Nicolas.
The international research program “ReNovRisk-CYCLONE” (RNR-CYC, 2017–2021) directly involves 20 partners from 5 countries of the south-west Indian-Ocean. It aims at improving the observation and modelling of tropical cyclones in the south-west Indian Ocean, as well as to foster regional cooperation and improve public policies adapted to present and future tropical cyclones risk in this cyclonic basin. This paper describes the structure and main objectives of this ambitious research project, with emphasis on its observing components, which allowed integrating numbers of innovative atmospheric and oceanic observations (sea-turtle borne and seismic data, unmanned airborne system, ocean gliders), as well as combining standard and original methods...
Tipo: Text Palavras-chave: Tropical cyclone; South-west Indian Ocean; Gliders; Unmanned airborne system; Biologging; Sea turtles; Global satellite navigation system; ReNovRisk; Numerical modelling; Climate modelling; Austral and cyclonic swells; Seismic data.
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00691/80281/83366.pdf
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Testing the transferability of track-based habitat models for sound marine spatial planning 5
Peron, Clara; Authier, Matthieu; Gremillet, David.
Aim Species distribution models (SDMs) are statistical tools aiming at mapping and predicting species distributions across landscapes. Data acquisition being limited in space and time, SDM are commonly used to predict species distribution in unsampled areas or years, with the expectation that modelled habitat-species relationships will hold across spatial or temporal contexts (i.e., model transferability). This key aspect of habitat modelling has major implications for spatial management, yet it has received limited attention, especially in the dynamic marine realm. Our aims were to test geographical and temporal habitat model transferability and to make recommendations for future population-scale habitat modelling. Location Methods Two contrasted regions...
Tipo: Text Palavras-chave: Biologging; Central-place foragers; Extrapolation; Habitat modelling; Seabirds; Transferability.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00470/58174/75133.pdf
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Validation of Dive Foraging Indices Using Archived and Transmitted Acceleration Data: The Case of the Weddell Seal 5
Heerah, Karine; Cox, Samantha; Blevin, Pierre; Guinet, Christophe; Charrassin, Jean-benoît.
Dive data collected from archival and satellite tags can provide valuable information on foraging activity via the characterization of movement patterns (e.g., wiggles, hunting time). However, a lack of validation limits interpretation of what these metrics truly represent in terms of behavior and how predators interact with prey. Head-mounted accelerometers have proven to be effective for detecting prey catch attempt (PrCA) behaviors, and thus can provide a more direct measure of foraging activity. However, device retrieval is typically required to access the high-resolution data they record, restricting use to animals returning to predictable locations. In this study, we present and validate data obtained from newly developed satellite-relay data tags,...
Tipo: Text Palavras-chave: Satellite relayed data logger; Accelerometers; Diving behavior; Movement ecology; Foraging; Sea-ice; Biologging.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00595/70687/68895.pdf
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