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| Registros recuperados: 34 | |
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| Chagné, D.; Lalanne, C.; Madur, D.; Kumar, S.; Frigério, J.M.; Krier, C.; Decroocq, S.; Savouré, A.; Bou-Dagher-Kharrat, M.; Bertocchi, E.; Brach, J.; Plomion, C.. |
| Tipo: Conference Paper |
Palavras-chave: AFLP; DOUBLE PSEUDO-TESTCROSS; TAILLE PHYSIQUE; CARTE GENETIQUE. |
| Ano: 2002 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB0300011664096195&uri=/notices/prodinra1/2009/12/ |
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| Moroldo, M.; Paillard, S.; Marconi, R.; Legeai, F.; Canaguier, A.; Cruaud, C.; de Berardinis, V.; Guichard, C.; Brunaud, V.; Le Clainche, I.; Scalabrin, S.; Testolin, R.; di Gaspero, G.; Morgante, M.; Adam-Blondon, A.F.. |
| Background: Whole-genome physical maps facilitate genome sequencing, sequence assembly, mapping of candidate genes, and the design of targeted genetic markers. An automated protocol was used to construct a Vitis vinifera 'Cabernet Sauvignon' physical map. The quality of the result was addressed with regard to the effect of high heterozygosity on the accuracy of contig assembly. Its usefulness for the genome-wide mapping of genes for disease resistance, which is an important trait for grapevine, was then assessed. Results: The physical map included 29,727 BAC clones assembled into 1,770 contigs, spanning 715,684 kbp, and corresponding to 1.5-fold the genome size. Map inflation was due to high heterozygosity, which caused either the separation of allelic... |
| Tipo: Journal Article |
Palavras-chave: MILDIOU; MALADIE FONGIQUE; CARTE GENETIQUE; SYSTEME IMMUNITAIRE; VIGNE; RESISTANCE AUX MALADIES; CARTOGRAPHIE; GENE CANDIDAT; GENETIQUE; SEQUENCE NUCLEOTIDIQUE; CABERNET SAUVIGNON PLANT IMMUNE SYSTEM; VITIS VINIFERA L.; NONHOST RESISTANCE; POWDERY MILDEW; GENOME SEQUENCE; LINKAGE MAP; RICE GENOME; BAC; ARABIDOPSIS; GENETICS. |
| Ano: 2008 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2011dc1cb8fa&uri=/notices/prodinra1/2011/03/ |
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| Jorge, V.; Fabbrini, F.; Faivre-Rampant, P.; Fladung, M.; Gaudet, M.; Lagercrantz, U.; Leplé, J.C.; Morgante, M.; Pakull, B.; Sabatti, M.; Storme, V.; Taylor, G.; Vitacolonna, N.; DeWoody, J.; Bastien, C.. |
| Comparative QTL mapping for adaptive traits among populations and species can lead to the identification of genomic regions conserved over a long evolutionary period and therefore potentially harboring genes of great importance for adaptive processes. At the same time, non-conserved QTLs could be responsible for local adaptation or interspecific differentiation.The availability of Populus as a model system for tree and woody perennial plant biology has largely been driven by the rapid development of genomic and molecular biology resources for this genus, culminating in the completion of a draft sequence of the Populus trichocarpa (black cottonwood) genome. Numerous genetic maps are available in different Populus and Salix species and QTLs for adaptive... |
| Tipo: Conference Paper |
Palavras-chave: GENE CANDIDAT; CARTE GENETIQUE; SEQUENCE GENOMIQUE; IDENTIFICATION DE GENES CANDIDATE GENE; GENETIC MAPPING; GENOME SEQUENCE; GENE IDENTIFICATION. |
| Ano: 2010 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20105597576d&uri=/notices/prodinra1/2010/11/ |
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| Chantry-Darmon, C.; Urien, C.; Hayes, H.; Bertaud, M.; Chadi, S.; Chardon, P.; Vaiman, D.; Rogel-Gaillard, C.. |
| Rabbit (Oryctolagus cuniculus) represents a valuablesource of biomedical models and corresponds to asmall but active economic sector in Europe for meatand fur. The rabbit genome has not been thoroughlystudied until recently, and high-resolution mapsnecessary for identification of genes and quantitativetrait loci (QTL) are not yet available. Our aim was toisolate over 300 new and regularly distributed (TG)nor (TC)n rabbit microsatellites. To achieve thispurpose, 164 microsatellite sequences were isolatedfrom gene-containing bacterial artificial chromosome(BAC) clones previously localized by fluorescencein situ hybridization (FISH) on all the rabbitchromosomes. In addition, 141 microsatellite sequenceswere subcloned from a plasmid genomiclibrary, and for 41... |
| Tipo: Journal Article |
Palavras-chave: CARTE GENETIQUE; LAPIN; CARTE CYTOGENETIQUE. |
| Ano: 2005 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20075d7b09fe&uri=/notices/prodinra1/2008/08/ |
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| Chantry-Darmon, C.; Bertaud, M.; Urien, C.; Chadi, S.; PERROCHEAU, M.; Rogel-Gaillard, C.; Hayes, H.. |
| Rabbit, a domestic species exploited both in animalproduction and medical research has only recently begunto be included in gene mapping projects, in particular by theFrench National Institute of Agronomics. By 2002, less than 60genes had been precisely localised on rabbit chromosomes,which led us to start a large-scale project on gene mapping inrabbit with the publication of 133 gene localisations in 2003(Chantry-Darmon et al., 2003). Here, we report the localisationof 102 new genes resulting in good coverage of the rabbitgenome and an eight-fold enrichment of the gene map. In addition,we have detected a new conserved segment between rabbitchromosome 4q15.3 and part of human chromosome 22 andthus improved the comparative map with the human genome. |
| Tipo: Journal Article |
Palavras-chave: CARTE GENETIQUE; GENETIQUE COMPAREE; LAPIN; HOMME. |
| Ano: 2005 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2007ee750b6e&uri=/notices/prodinra1/2008/08/ |
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| Hatey, F.; Tosser-Klopp, G.; Clouscard-Martinato, C.; Mulsant, P.; Gasser, F.. |
| Les « étiquettes » correspondent aux séquences des extrémités des ADN complémentaires, obtenues de manière systématique à partir d’une seule réaction de séquençage. Cependant, à partir d’un seul gène plusieurs étiquettes différentes peuvent être obtenues : celles qui correspondent aux deux extrémités de l’ADN complémentaire, aux ADN complémentaires de tailles différentes synthétisés à partir d’un même ARN messager, et aux différents ARN messagers issus d’une même séquence d’ADN génomique. L’identification des gènes correspondants est faite par comparaison avec les séquences nucléiques ou protéiques contenues dans les bases de données publiques (GenBank ou EMBL, SwissProt), en utilisant des logiciels d’alignement automatique tels que FASTA ou... |
| Tipo: Journal Article |
Palavras-chave: MARQUEUR; GENETIQUE COMPAREE; CARTE GENETIQUE. |
| Ano: 1998 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB0000008273079921&uri=/notices/prodinra1/2007/09/ |
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| Bally, P.; Grandaubert, J.; Rouxel, T.; Balesdent, M.H.. |
| BACKGROUND: Micro-and minisatellites are among the most powerful genetic markers known to date. They have been used as tools for a large number of applications ranging from gene mapping to phylogenetic studies and isolate typing. However, identifying micro-and minisatellite markers on large sequence data sets is often a laborious process. RESULTS: FONZIE was designed to successively 1) perform a search for markers via the external software Tandem Repeat Finder, 2) exclude user-defined specific genomic regions, 3) screen for the size and the percent matches of each relevant marker found by Tandem Repeat Finder, 4) evaluate marker specificity (i.e., occurrence of the marker as a single copy in the genome) using BLAST2.0, 5) design minisatellite primer pairs... |
| Tipo: Journal Article |
Palavras-chave: PCR; SEQUENCE NUCLEOTIDIQUE; CHAMPIGNON PHYTOPATHOGENE; POLYMORPHISME; CARTE GENETIQUE; CARTOGRAPHIE; GENOME BIOINFORMATIQUE; CARTOGRAPHIE; MARQUEUR GENETIQUE; MINISATELLITE; MICROSATELLITE; PIPELINE; PRIMERS DESIGN. |
| Ano: 2010 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20113c55270c&uri=/notices/prodinra1/2011/03/ |
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| Kocher, T.D.. |
| Nous avons construit une carte génétique pour le tilapia #Oreochromis niloticus$ en utilisant des marqueurs ADN. La ségrégation de 62 locus microsatellites et de 112 AFLP (total = 174) a été étudiée dans 41 embryons haploïdes provenant d'une seule femelle. Nous avons identifié des liaisons entre 162 (93,1%) de ces marqueurs. Au total, 95% des microsatellites et 92% des AFLP sont liés sur la carte finale. La carte s'étend sur 704 cM en 30 groupes de liaison couvrant les 22 chromosomes de l'espèce. Vingt-quatre de ces groupes de liaison contiennent au moins un locus microsatellite. A partir de ces marqueurs qui sont à 15 cM, ou moins, les uns des autres, la longueur totale de la carte est approximativement de 100 à 1200 cM. Les données suggèrent que les... |
| Tipo: Text |
Palavras-chave: POISSON D'EAU DOUCE; MARQUEUR GENETIQUE; GENOTYPE; POLYMORPHISME GENETIQUE; CARTE GENETIQUE. |
| Ano: 1998 |
URL: http://www.documentation.ird.fr/hor/fdi:010015275 |
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| Registros recuperados: 34 | |
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