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| Registros recuperados: 54 | |
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| Aubourg, S.; Martin-Magniette, M.L.; Brunaud, V.; Taconnat, L.; Bitton, F.; Balzergue, S.; Jullien, P.E.; Ingouff, M.; Thareau, V.; Schiex, T.; Lecharny, A.; Renou, J.P.. |
| Background: Since the finishing of the sequencing of the Arabidopsis thaliana genome, the Arabidopsis community and the annotator centers have been working on the improvement of gene annotation at the structural and functional levels. In this context, we have used the large CATMA resource on the Arabidopsis transcriptome to search for genes missed by different annotation processes. Probes on the CATMA microarrays are specific gene sequence tags (GSTs) based on the CDS models predicted by the Eugene software. Among the 24 576 CATMA v2 GSTs, 677 are in regions considered as intergenic by the TAIR annotation. We analyzed the cognate transcriptome data in the CATMA resource and carried out data-mining to characterize novel genes and improve gene models.... |
| Tipo: Journal Article |
Palavras-chave: ADNC; EXPRESSION DES GENES; SEQUENCE NUCLEOTIDIQUE; ARABIDOPSIS THALIANA; GENOME; MODELE; METHODE STATISTIQUE; PROTEINE; TRANSCRIPTION; ARN MESSAGER; PCR; RT-PCR CDNA MICROARRAY DATA; EXPRESSION PROFILES; SEQUENCE TAGS; ANNOTATION; THALIANA; NORMALIZATION; REGIONS; TOOLS. |
| Ano: 2007 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20116115e9a4&uri=/notices/prodinra1/2011/03/ |
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| Gagnot, S.; Tamby, J.P.; Martin-Magniette, M.L.; Bitton, F.; Taconnat, L.; Balzergue, S.; Aubourg, S.; Renou, J.P.; Lecharny, A.; Brunaud, V.. |
| CATdb is a free resource available at http://urgv.evry.inra.fr/CATdb that provides public access to a large collection of transcriptome data for Arabidopsis thaliana produced by a single Complete Arabidopsis Transcriptome Micro Array (CATMA) platform. CATMA probes consist of gene-specific sequence tags (GSTs) of 150500 bp. The v2 version of CATMA contains 24 576 GST probes representing most of the predicted A. thaliana genes, and 615 probes tiling the chloroplastic and mitochondrial genomes. Data in CATdb are entirely processed with the same standardized protocol, from microarray printing to data analyses. CATdb contains the results of 53 projects including 1724 hybridized samples distributed between 13 different organs, 49 different developmental... |
| Tipo: Journal Article |
Palavras-chave: CDNA MICROARRAY DATA; SEQUENCE TAGS; INFORMATION; GENOME; NORMALIZATION; BIOLOGY; GENE COMPONENTS ; ADNC; SEQUENCE NUCLEOTIDIQUE; NORMALISATION; BIOLOGIE; ARABIDOPSIS THALIANA; MUTATION; MITOCHONDRIE; CHLOROPLASTE; METHODE STATISTIQUE; EXPRESSION DES GENES. |
| Ano: 2008 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20111a416d88&uri=/notices/prodinra1/2011/03/ |
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| Le Cunff, L.; Fournier-Level, A.; Laucou, V.; Vezzulli, S.; Lacombe, T.; Adam-Blondon, A.F.; Boursiquot, J.M.; This, P.. |
| Background: The first high quality draft of the grape genome sequence has just been published. This is a critical step in accessing all the genes of this species and increases the chances of exploiting the natural genetic diversity through association genetics. However, our basic knowledge of the extent of allelic variation within the species is still not sufficient. Towards this goal, we constructed nested genetic core collections (G-cores) to capture the simple sequence repeat (SSR) diversity of the grape cultivated compartment (Vitis vinifera L. subsp. sativa) from the world's largest germplasm collection (Domaine de Vassal, INRA Herault, France), containing 2262 unique genotypes. Results: Sub-samples of 12, 24, 48 and 92 varieties of V. vinifera L.... |
| Tipo: Journal Article |
Palavras-chave: RESISTANCE AUX MALADIES; VIGNE; DIVERSITE; POLYMORPHISME; SEQUENCE NUCLEOTIDIQUE; MARQUEUR GENETIQUE; EXPRESSION DES GENES; DIVERSITE GENETIQUE SINGLE NUCLEOTIDE POLYMORPHISMS; LINKAGE DISEQUILIBRIUM; CULTIVATED GRAPEVINE; MICROSATELLITE LOCI; CROHNS DISEASE; WINE GRAPES; EXPRESSION; MUTATION; GENOME; SUSCEPTIBILITY. |
| Ano: 2008 |
URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20117dca1051&uri=/notices/prodinra1/2011/05/ |
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| Trouslot, Marie-France; Champagnat, M.; Tort, M.; Loiseau, M.; Eraud, C.. |
| L'étude morphologique des plantes issues de graines, de l'Igname du complexe #Dioscorea cayenensi - D. rotundata$, a été réalisée par examen en microscopie optique de leur développement, depuis l'embryon dans la graine jusqu'à la jeune plante âgée de deux mois. Au cours du premier mois après le semis des graines, les organes liés étroitement avec la partie basale axiale de la jeune plante s'initient et/ou se développent ; ce sont le cotylédon, les trois premières feuilles, le système racinaire et le tubercule. La première feuille, présente dans l'embryon, est particulière parce qu'elle ne possède pas de bourgeon axillaire. La deuxième feuille devient une écaille à l'aisselle de laquelle se développe un système axillaire important. L'entrenoeud sous-jacent... |
| Tipo: Text |
Palavras-chave: IGNAME; DEVELOPPEMENT; MORPHOLOGIE; PLANTE; MICROSCOPIE OPTIQUE; EMBRYON; GENOME; COMPLEXE D'ESPECES. |
| Ano: 1993 |
URL: http://www.documentation.ird.fr/hor/fdi:40069 |
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| Registros recuperados: 54 | |
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