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| Registros recuperados: 18 | |
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| Marchiori, Natalia C.; Pariselle, Antoine; Pereira, Joaber, Jr.; Agnese, Jean-francois; Durand, Jean-dominique; Vanhove, Maarten P. M.. |
| Representatives of Ligophorus Euzet et Suriano, 1977 were found on the gills of Mugil liza Valenciennes caught in southern Brazil. They were identified as Ligophorus uruguayense Failla Siquier et Ostrowski de Nufiez, 2009 and Ligophorus saladensis Marcotegui et Martorelli, 2009, even though specific identification proved to be difficult due to inconsistencies in some diagnostic features reported for these two species. Therefore, a combined morphological and molecular approach was used to critically review the validity of these species, by means of phase contrast and confocal fluorescence microscopical examination of sclerotised hard parts, and assessing the genetic divergence between L. saladensis, L. uruguayense and their congeners using rDNA sequences.... |
| Tipo: Text |
Palavras-chave: Morphology; Molecular systematics; Mullet; Parasite; Taxonomy. |
| Ano: 2015 |
URL: https://archimer.ifremer.fr/doc/00626/73847/73656.pdf |
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| Hilsdorf,Silva; Oliveira,Claudio; Lima,Flávio César Thadeo de; Matsumoto,Cristianne Kayoko. |
| The genus Brycon, the largest subunit of the Bryconinae, has 42 valid species distributed from southern Mexico to the La Plata River in Argentina. Henochilus is a monotypic genus, comprising a single species (H. wheatlandii) found in the upper Rio Doce basin. In the present study, partial sequences of the mitochondrial gene 16S were obtained for fifteen species of Brycon and for Henochilus wheatlandii. The results showed that the genus Brycon is paraphyletic, since Henochilus is the sister-group of B. ferox and B. insignis. The most basal species analyzed were the trans-Andean species B. henni, B. petrosus, and B. chagrensis. |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Phylogeny; Molecular systematics; Mitochondrial DNA; Fish evolution; Systematic. |
| Ano: 2008 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200034 |
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| Erpenbeck, D.; Hooper, J.N.A.; List-Armitage, S.E.; Degnan, B.M.; Wörheide, G.; Soest, R.W.M. van. |
| This is the second part of a revision and re-classification of the demosponge family Sollasellidae, and an example of a successful use of combined morphological and molecular data. Sollasella had been a poorly known, long forgotten taxon, placed incertae sedis in the order Hadromerida in the last major revision of the demosponges. It has recently been suggested to belong to Raspailiidae in the order Poecilosclerida due to striking morphological similarities. The present analysis verified this re-classification using molecular markers. Comparing 28S rDNA fragments of Sollasella cervicornis, a newly described species S. moretonensis and a representative set of raspailiid and hadromerid samples. In our analyses Sollasella clearly clusters inside the... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Sponges; Classification; Raspailiidae; Sollasella; Raspailopsis; 28S rDNA; Molecular systematics; 42.72. |
| Ano: 2007 |
URL: http://www.repository.naturalis.nl/record/226474 |
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| Gottschling, M.; Hilger, H.H.. |
| Ehretia (Ehretiaceae, Boraginales) has been divided into two major clades, characterised by fruits with four endocarpids (Ehretia I, including species of Ehretia formerly belonging to Rotula) and by fruits with two endocarpids (Ehretia II, plus E. microphylla (= Carmona retusa) with an undivided endocarp), respectively. Both molecular (ITS1) and morphological data support the recognition of an additional clade, Ehretia III (E. longiflora species group). Its representatives are characterised by four endocarpids (as in Ehretia I), but differ in the presence of distinct lamellae on the abaxial surface of each endocarpid (as in Bourreria, also belonging to Ehretiaceae). However, molecular data suggest a close relationship with Ehretia II. At least three... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Ehretia longiflora; Anatomy; Fruit; ITS1; Molecular systematics; Phylogeny; Phylogeography. |
| Ano: 2004 |
URL: http://www.repository.naturalis.nl/record/525580 |
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| Matabos, M.; Plouviez, S.; Hourdez, S.; Desbruyeres, Daniel; Legendre, P.; Waren, A.; Jollivet, D.; Thiebaut, E.. |
| Aim Deep-sea hydrothermal vents have now been reported along all active mid-ocean ridges and back-arc basins, but the boundaries of biogeographic entities remain questionable owing to methodological issues. Here we examine biogeographic patterns of the vent fauna along the East Pacific Rise (EPR) and determine the relative roles of regional and local factors on the distribution of biodiversity associated with mussel beds along a poorly explored zone, the southern EPR (SEPR). Location East Pacific Rise. Methods A species list of macrobenthic invertebrates along the EPR was compiled from the literature and supplemented with data recovered during the French research cruise BIOSPEEDO carried out in 2004 along the SEPR. Biogeographic patterns were assessed by... |
| Tipo: Text |
Palavras-chave: Biogeographic patterns; Community structure; East Pacific Rise; Hydrothermal vents; Marine biodiversity; Molecular systematics; Mussel beds; Species richness. |
| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00033/14395/11767.pdf |
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| Arntzen, J.W.; Recuero, E.; Canestrelli, D.; Martínez-Solano, I.. |
| Species delineation remains one of the most challenging tasks in the study of biodiversity, mostly owing to the application of different species concepts, which results in contrasting taxonomic arrangements. This has important practical consequences, since species are basic units in fields like ecology and conservation biology. We here review molecular genetic evidence relevant to the systematics of toads in the Bufo bufo species group (Anura, Bufonidae). Two studies recently published in this journal (Recuero et al., MPE 62: 71–86 and Garci´a-Porta et al., MPE 63: 113–130) addressed this issue but reached opposing conclusions on the taxonomy of the group (four versus two species). In particular, allozyme data in the latter paper were interpreted as... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Bufo bufo; Bufo spinosus; Molecular systematics; Bufo verrucosissimus; Phylogeny; Allozymes; 42.82. |
| Ano: 2013 |
URL: http://www.repository.naturalis.nl/record/470065 |
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| Reinhardt,Érica. L.; Ramos,Patrícia L.; Manfio,Gilson P.; Barbosa,Heloiza R.; Pavan,Crodowaldo; Moreira-Filho,Carlos A.. |
| Fourteen strains of nitrogen-fixing bacteria were isolated from different agricultural plant species, including cassava, maize and sugarcane, using nitrogen-deprived selective isolation conditions. Ability to fix nitrogen was verified by the acetylene reduction assay. All potentially nitrogen-fixing strains tested showed positive hybridization signals with a nifH probe derived from Azospirillum brasilense. The strains were characterized by RAPD, ARDRA and 16S rDNA sequence analysis. RAPD analyses revealed 8 unique genotypes, the remaining 6 strains clustered into 3 RAPD groups, suggesting a clonal origin. ARDRA and 16S rDNA sequence analyses allowed the assignment of 13 strains to known groups of nitrogen-fixing bacteria, including organisms from the... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Endophytic bacteria; Diazotrophs; Selective isolation; Molecular systematics. |
| Ano: 2008 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822008000300002 |
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| Cabezas, Patricia; Macpherson, Enrique; Machordom, Annie. |
| The family Galatheidae is among the most diverse families of anomuran decapod crustaceans, and the South-West Pacific is a biodiversity hot spot for these squat lobsters. Attempts to clarify the taxonomic and evolutionary relationships of the Galatheidae on the basis of morphological and molecular data have revealed the existence of several cryptic species, differentiated only by subtle morphological characters. Despite these efforts, however, relationships among genera are poorly understood, and the family is in need of a detailed systematic review. In this study, we assess material collected in different surveys conducted in the Solomon Islands, as well as comparative material from the Fiji Islands, by examining both the morphology of the specimens and... |
| Tipo: Text |
Palavras-chave: 16S rRNA gene; COI gene; Decapoda; Molecular systematics; Morphology. |
| Ano: 2009 |
URL: https://archimer.ifremer.fr/doc/00205/31675/30058.pdf |
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| Morgado, L.N.; Noordeloos, M.E.; Lamoureux, Y.; Gem, J.. |
| Species from Entoloma subg. Entoloma are commonly recorded from both the Northern and Southern Hemispheres and, according to literature, most of them have at least Nearctic-Palearctic distributions. However, these records are based on morphological analysis, and studies relating morphology, molecular data and geographical distribution have not been reported. In this study, we used phylogenetic species recognition criteria through gene genealogical concordance (based on nuclear ITS, LSU, rpb2 and mitochondrial SSU) to answer specific questions considering species limits in Entoloma subg. Entoloma and their geographic distribution in Europe, North America and Australasia. The studied morphotaxa belong to sect. Entoloma, namely species like the notorious... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Biodiversity; DNA barcoding; Entolomataceae; Fungal biogeography; Molecular systematics; Phylogenetic species. |
| Ano: 2013 |
URL: http://www.repository.naturalis.nl/record/532443 |
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| Bonifacio, Paulo; Menot, Lenaick. |
| Polynoidae contains ~900 species within 18 subfamilies, some of them restricted to the deep sea. Macellicephalinae is the most diverse among these deep-sea subfamilies. In the abyssal Equatorial Pacific Ocean, the biodiversity of benthic communities is at stake in the Clarion-Clipperton Fracture Zone (CCFZ) owing to increased industrial interest in polymetallic nodules. The records of polychaetes in this region are scarce. Data gathered during the JPI Oceans cruise SO239 made a significant contribution to fill this gap, with five different localities sampled between 4000 and 5000 m depth. Benthic samples collected using an epibenthic sledge or a remotely operated vehicle resulted in a large collection of polynoids. The aims of this study are as follows:... |
| Tipo: Text |
Palavras-chave: Deep sea; Identification key; Molecular systematics; Morphology; New genera; New species; Phylogeny; Polychaeta. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00467/57902/60217.pdf |
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| Damm, U.; Mostert, L.; Crous, P.W.; Fourie, P.H.. |
| The genus Phaeoacremonium is associated with opportunistic human infections, as well as stunted growth and die-back of various woody hosts, especially grapevines. In this study, Phaeoacremonium species were isolated from necrotic woody tissue of Prunus spp. (plum, peach, nectarine and apricot) from different stone fruit growing areas in South Africa. Morphological and cultural characteristics as well as DNA sequence data (5.8S rDNA, ITS1, ITS2, â-tubulin, actin and 18S rDNA) were used to identify known, and describe novel species. From the total number of wood samples collected (257), 42 Phaeoacremonium isolates were obtained, from which 14 species were identified. Phaeoacremonium scolyti was most frequently isolated, and present on all Prunus species... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Diaporthales; Molecular systematics; Pathogenicity; Togninia; Togniniaceae. |
| Ano: 2008 |
URL: http://www.repository.naturalis.nl/record/531916 |
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| Azevedo,Marisa F.C.; Oliveira,Claudio; Pardo,Belén G.; Martínez,Paulino; Foresti,Fausto. |
| The fish order Pleuronectiformes, composed of 14 families, has two suborders: Psettodoidei (with one family) and Pleuronectoidei (with thirteen families). The relationships among families of Pleuronectoidei and among the genera of their families have extensively been debated and a consensus has not yet been reached. In the present study, partial sequences of the 12S and 16S mitochondrial rRNA genes were obtained from 19 species belonging to the families Achiridae, Bothidae, Cynoglossidae, Paralichthyidae, Pleuronectidae, Scophthalmidae, and Soleidae. Additional sequences of 42 pleuronectiform species were obtained from GenBank. Phylogenetic analyses were conducted by the methods of maximum-parsimony, maximum-likelihood and Bayesian inference. Our results... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Phylogeny; Molecular systematics; Mitochondrial DNA; Fish evolution; Flatfishes. |
| Ano: 2008 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200023 |
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| Wanntorp, L.. |
| Hoya with perhaps 300 species is one of the most diverse angiosperm genera in the tropical rainforests of Southeast Asia and New Guinea. Knowledge of the number of species and their relationships is still very unsatisfactory. Floral characters have been used to subdivide the genus into sections, although none of these groups were based on phylogenetic relationships. Recently, molecular phylogenetic studies have shed new light on the intrageneric relationships of the genus by identifying three main monophyletic clades, in addition to a core Hoya group that includes most of the species examined. One clade includes New Guinean/Australian species, while the other two, the Acanthostemma and the Eriostemma clades, mainly correspond to existing sections. I here... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Acanthostemma; Core Hoya; Eriostemma; Hoya; Molecular systematics; New Guinean/Australian clade; Phylogenetic tree. |
| Ano: 2009 |
URL: http://www.repository.naturalis.nl/record/526034 |
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| Pante, Eric; Puillandre, Nicolas; Viricel, Amélia; Arnaud-haond, Sophie; Aurelle, Didier; Castelin, Magalie; Chenuil, Anne; Destombe, Christophe; Forcioli, Didier; Valero, Myriam; Viard, Frederique; Samadi, Sarah. |
| Connectivity among populations determines the dynamics and evolution of populations, and its assessment is essential in ecology in general and in conservation biology in particular. The robust basis of any ecological study is the accurate delimitation of evolutionary units, such as populations, metapopulations and species. Yet a disconnect still persists between the work of taxonomists describing species as working hypotheses and the use of species delimitation by molecular ecologists interested in describing patterns of gene flow. This problem is particularly acute in the marine environment where the inventory of biodiversity is relatively delayed, while for the past two decades, molecular studies have shown a high prevalence of cryptic species. In this... |
| Tipo: Text |
Palavras-chave: Connectivity; Marine organisms; Molecular systematics; Taxonomy. |
| Ano: 2015 |
URL: https://archimer.ifremer.fr/doc/00248/35952/35301.pdf |
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| Registros recuperados: 18 | |
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