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A soft technology to improve survival and reproductive performance of Litopenaeus stylirostris by counterbalancing physiological disturbances associated with handling stress ArchiMer
Wabete, Nelly; Chim, Liet; Pham, Dominique; Lemaire, Pierrette; Massabuau, J.
The consequences of handling stress (fishing, transfer, eyestalk ablation) on shrimp broodstock are poorly documented. The weakness of farmed shrimp, Litopenaeus stylirostris, during winter is a major problem in New Caledonia, because of seasonal climate (tropical-sub-temperate). The transfer of broodstock in winter from earthen outdoor ponds to indoor maturation tanks in the hatchery (T=20 degrees C, Salinity=35 parts per thousand, fed shrimp) usually leads, after 48 h, to high mortality (up to 70%). Eyestalk ablation to induce ovarian maturation in females leads to further mortality. Starting from a background analysis of physiological disturbances (initial osmoregulatory imbalance) associated with handling stress (Wabete, N., Chim, L., Lernaire, P.,...
Tipo: Text Palavras-chave: Eyestalk ablation; Spawning; Handling stress; Broodstock; Litopenaeus stylirostris; Shrimp.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-1880.pdf
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Análise de agrotóxicos organoclorados em camarão e pescado por cromatografia a gás com detector de micro captura de eletrons (GC-mECD). Repositório Alice
FERRACINI, V. L.; QUEIROZ, S. C. do N. de; ROSA, M. A.; SOUZA, D. R. C. de; QUEIROZ, J. F. de; PARAIBA, L. C..
Resumo: Resumo: Otimizou-se um método analítico para a determinação de multirresíduos de organoclorados em camarão marinho para a espécie Litopenaeus vannamei e em músculo de peixes da espécie Oreochromis sp., chamada popularmente de tilápia-vermelha. Utilizou-se a técnica de extração denominada QuEChERS, empregando cromatografi a a gás com detector de micro captura de elétrons (CG-mECD) para análise dos seguintes organoclorados em amostras de camarão e em músculo de peixes: hexaclorobenzeno, lindano, DDE, DDT, clorpirifós, endossulfan sulfato, endossulfan beta, endossulfan alfa, heptacloro, aldrin, endrin e dieldrin. O limite de detecção para todos os compostos foi de 0,0005 mg.g-1 e o limite de quantificação do método foi estabelecido em 0,005 mg.g-1. Os...
Tipo: Artigo em periódico indexado (ALICE) Palavras-chave: Multirresíduos; Camarão; Agrotóxico; Análise química; Cromatografia gasosa; Camarão; Peixe; Tilápia vermelha; Tilápia; Multiresidue analysis; Gas chromatography; Organochlorine pesticides; Shrimp; Litopenaeus vannamei; Oreochromis.
Ano: 2014 URL: http://www.alice.cnptia.embrapa.br/handle/doc/1005834
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Arbitrarily primed PCR to type Vibrio spp. Pathogenic for shrimp ArchiMer
Goarant, Cyrille; Merien, Fabrice; Berthe, Franck; Mermoud, Isabelle; Perolat, Philippe.
A molecular typing study on Vibrio strains implicated in shrimp disease outbreaks in New Caledonia and Japan was conducted by using AP-PCR (arbitrarily primed PCR). It allowed rapid identification of isolates at the genospecies level and studies of infraspecific population structures of epidemiological interest. Clusters identified within the species Vibrio penaeicida were related to their area of origin, allowing discrimination between Japanese and New Caledonian isolates, as well as between those from two different bays in New Caledonia separated by only 50 km. Other subclusters of New Caledonian V. penaeicida isolates could be identified, but it was not possible to link those differences to accurate epidemiological features. This contribution of AP-PCR...
Tipo: Text Palavras-chave: Vibrio spp.; Shrimp; Molecular typing.
Ano: 1999 URL: http://archimer.ifremer.fr/doc/1999/publication-2734.pdf
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Bacterial community characterization of water and intestine of the shrimp Litopenaeus stylirostris in a biofloc system ArchiMer
Cardona, Emilie; Gueguen, Yannick; Magré, Kevin; Lorgeoux, Bénédicte; Piquemal, David; Pierrat, Fabien; Noguier, Florian; Saulnier, Denis.
Background Biofloc technology (BFT), a rearing method with little or no water exchange, is gaining popularity in aquaculture. In the water column, such systems develop conglomerates of microbes, algae and protozoa, together with detritus and dead organic particles. The intensive microbial community presents in these systems can be used as a pond water quality treatment system, and the microbial protein can serve as a feed additive. The current problem with BFT is the difficulty of controlling its bacterial community composition for both optimal water quality and optimal shrimp health. The main objective of the present study was to investigate microbial diversity of samples obtained from different culture environments (Biofloc technology and clear...
Tipo: Text Palavras-chave: Shrimp; Biofloc; Clear sea water; Bacterial communities; Culture environment; Microbiota.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00346/45694/45314.pdf
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Bacterial symbionts and mineral deposits in the branchial chamber of the hydrothermal vent shrimp Rimicaris exoculata: relationship to moult cycle ArchiMer
Corbari, Laure; Zbinden, Magali; Cambon-bonavita, Marie-anne; Gaill, Françoise; Compere, Philippe.
The shrimp Rimicaris exoculata is considered a primary consumer that dominates the fauna of most Mid-Atlantic Ridge hydrothermal ecosystems. The shrimps harbour in their gill chamber an important ectosymbiotic community of chemoautotrophic bacteria associated with iron oxide deposits. The settlement and development of this ectosymbiosis was investigated using microscopy techniques (light microscopy, LM; and scanning, transmission and environmental scanning electron microscopy: SEM and ESEM, respectively) for shrimps from 2 different vent fields (Rainbow, 36 degrees 14.0' N and TAG, 26 degrees 08.0' N). The results revealed a bacterial re-colonisation after each exuviation and a development of the bacterial community in 5 steps in relation to the moult...
Tipo: Text Palavras-chave: Iron oxides; Ectosymbiosis; Moult cycle; Shrimp; Hydrothermal vents.
Ano: 2008 URL: http://archimer.ifremer.fr/doc/2008/publication-4626.pdf
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Bioeconomic model of the dynamics of fisheries facing global economic and environment changes: the French Guyana shrimp fishery ArchiMer
Chaboud, Christian; Thebaud, Olivier.
In the past two decades, the French Guyana shrimp fishery has known dramatic evolutions, largely driven by global changes. On the economic side, two major driving factors are the globalization of the shrimp market, with a decreasing trend in real prices, an d the long-term increase in fuel prices worldwide. On the environmental side, recruitment of the two main species of shrimp targeted in the fishery seems to have decreased over the last decade. This decrease is probably related to hydroclimatic modifications linked to global change. It is important to assess the adaptive capacity of the fishery facing such changes, as well as the relevance of past and future public policies to improve this capacity. A key component of this adaptive capacity is the way...
Tipo: Text Palavras-chave: Bioeconomic modeling; Fishery management; Subsidies; Shrimp; French Guyana.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00243/35473/33988.pdf
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Biofilm formation by Vibrio parahaemolyticus on different surfaces and its resistance to sodium hypochlorite Ciência Rural
Rosa,Janaina Viana da; Conceição,Natália Volpato da; Conceição,Rita de Cássia dos Santos da; Timm,Cláudio Dias.
ABSTRACT: Vibrio parahaemolyticus is an important pathogen for both fish industry and consumers. It forms biofilm which makes it difficult to eliminate this microorganism using sanitizers. This study aimed to assess biofilm formation on different surfaces and effect of biofilm on resistance to sanitizers. Eight isolates of biofilm-forming V. parahaemolyticus were tested for the ability to form biofilms on a number of surfaces including high density polyethylene, stainless steel, glass, exoskeleton of Farfantepenaeus paulensis (Pink Shrimp), and operculum of Micropogonias furnieri (Whitemouth Croaker). Efficiency of sanitizer sodium hypochlorite against the bacteria was evaluated in the biofilms formed on the surface of the materials used; out the eight...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Bacterial contamination; Sanitizers; Food safety; Fish; Shrimp.
Ano: 2018 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782018001200451
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Blow Your Nose, Shrimp! Unexpectedly Dense Bacterial Communities Occur on the Antennae and Antennules of Hydrothermal Vent Shrimp ArchiMer
Zbinden, Magali; Gallet, Alison; Szafranski, Kamil M.; Machon, Julia; Ravaux, Juliette; Leger, Nelly; Duperron, Sebastien.
In crustaceans, as in other animals, perception of environmental cues is of key importance for a wide range of interactions with the environment and congeners. Chemoreception involves mainly the antennae and antennules, which carry sensilla that detect water-borne chemicals. The functional importance of these as exchange surfaces in the shrimp's sensory perception requires them to remain free of any microorganism and deposit that could impair the fixation of odorant molecules on sensory neurons. We report here the occurrence of an unexpected dense bacterial colonization on surface of the antennae and antennules of four hydrothermal vent shrimp species. Microscopic observation, qPCR and 16S rRNA barcoding reveal the abundance, diversity and taxonomic...
Tipo: Text Palavras-chave: Hydrothermal; Shrimp; Alvinocarididae; Chemosensory perception; Antennules; Bacteria; Grooming.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00484/59527/62507.pdf
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Combined effect of temperature and salinity on osmoregulation of juvenile and subadult Penaeus stylirostris ArchiMer
Lemaire, Pierrette; Bernard, Eric; Martinez-paz, J; Chim, Liet.
In New Caledonia, the "syndrome 93," which results in mass mortalities of farmed shrimp Penaeus stylirostris, occurs during the transitional and the cold seasons. The transitional season is characterized by an important fall in the average water temperature from 28 to 19 degreesC in 2 weeks. Besides this marked temperature fall, there are also nyctemeral temperature changes of up to 7 degreesC in 12 h. The cold season is characterized by an average water temperature of 19 degreesC with extreme lows of 14 degreesC. The objective of this study was to determine the effect of temperature and its variations on the osmoregulatory capacity of juvenile (7-10 g average weight) and subadult (25 g average weight) shrimps subjected to conditions of different salinity....
Tipo: Text Palavras-chave: Temperature; Salinity; Osmoregulatory capacity; Penaeus stylirostris; Shrimp.
Ano: 2002 URL: http://archimer.ifremer.fr/doc/2002/publication-395.pdf
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Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits ArchiMer
Goudenege, David; Labreuche, Yannick; Krin, Evelyne; Ansquer, Dominique; Mangenot, Sophie; Calteau, Alexandra; Medigue, Claudine; Mazel, Didier; Polz, Martin F.; Le Roux, Frederique.
Vibrio nigripulchritudo is an emerging pathogen of farmed shrimp in New Caledonia and other regions in the Indo-Pacific. The molecular determinants of V. nigripulchritudo pathogenicity are unknown; however, molecular epidemiological studies have suggested that pathogenicity is linked to particular lineages. Here, we performed high-throughput sequencing-based comparative genome analysis of 16 V. nigripulchritudo strains to explore the genomic diversity and evolutionary history of pathogen-containing lineages and to identify pathogen-specific genetic elements. Our phylogenetic analysis revealed three pathogen-containing V. nigripulchritudo clades, including two clades previously identified from New Caledonia and one novel clade comprising putatively...
Tipo: Text Palavras-chave: Horizontal gene transfer; Nigritoxin; Phylogeny; Shrimp; Virulence; Vibrio.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00160/27117/28369.pdf
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Comparative study of bactrial infections responsible for mass mortality in penaeid shrimp hatcheries of the Pacific zone ArchiMer
Le Groumellec, M.; Haffner, Philippe; Martin, B.; Martin, C..
Mass mortality associated with luminescence has been dbserved in sorne Thai and Ecuadorian penaeid shrimp hatcheries in recent years. Samples collected from hatcheries in these two different areas revealed luminescent sucrose-negative Vibrio strains in larVal rearing tanks where mortality occurred. Pathogenicity trials were carried out to identify the causative agents of mortality and to study the course of infection . . Results showed that strains isolated from Thai hatclleries were more virulent than Ecuadorian strains when tested on different larval stages of Penaeus monodon. The virulence of these strains was also estimated. Trials on other species ofpenaeid shrimp demonstrated the specifie action of Thai strains. Drug sensitivity patterns revealed a...
Tipo: Text Palavras-chave: Mass mortality; Bacterial; Vibrio; Hatcheries; Penaeus monodon; Shrimp.
Ano: 1993 URL: http://archimer.ifremer.fr/doc/1993/acte-6100.PDF
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Crescimento e fator de condição na fase juvenil de Farfantepenaeus brasiliensis (Latreille) e F. paulensis (Pérez-Farfante) (Crustacea, Decapoda, Penaeidae) em uma lagoa costeira tropical do Rio de Janeiro, Brasil Zoologia
Albertoni,Edélti Faria; Palma-Silva,Cleber; Esteves,Francisco de Assis.
The growth relations of the shrimps Farfantepenaeus brasiliensis (Latreille, 1817) and F. paulensis (Pérez-Farfante, 1967) were evaluated at Imboassica lagoon, Macaé, Rio de Janeiro State, between June 1995 and September 1997, in four periods after events of sandbar opening. This sandbar separated the lagoon from the Atlantic Ocean. Through the evaluation of the weight/length relationships for the two species, significant differences in each interval after the sandbar openings were observed, as much among males and females as among all individuals of the same species. The results indicated that both species presented negative allometric growth in most of the studied occasions. The frequency and abundance of the two species in the lagoon is linked to many...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Morphometry; Shrimp; Weight/length relationship.
Ano: 2003 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0101-81752003000300008
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Cross breeding of different domesticated lines as a simple way for genetic improvement in small aquaculture industries: Heterosis and inbreeding effects on growth and survival rates of the Pacific blue shrimp Penaeus (Litopenaeus) stylirostris ArchiMer
Goyard, Emmanuel; Goarant, Cyrille; Ansquer, Dominique; Brun, Pierre; De Decker, Sophie; Dufour, Robert; Galinie, C; Peignon, Jean-marie; Pham, Dominique; Vourey, Elodie; Harache, Yves; Patrois, Jacques.
Two populations of the Latin American shrimp Penaeus (Litopenaeus)stylirostris domesticated in Hawaii and in New Caledonia were previously shown to be genetically differentiated and proven highly inbred. In New Caledonia, where different Vibriosis affect shrimp production and antibiotic use is banned in growing ponds, the Hawaiian population was introduced to increase the allelic variability available for local shrimp farmers and start a genetic improvement program. Growth and survival rates of the two pure populations and the two-way F-1-hybrids obtained by breeding Hawaiian animals with New Caledonian animals were assessed in several simple experiments (earthen ponds, floating cages and experimental infection challenges) during two years on two...
Tipo: Text Palavras-chave: Vibriosis; Survival; Growth; Penaeus Litopenaeus stylirostris; Shrimp; Cross breeding; Genetic improvement.
Ano: 2008 URL: http://archimer.ifremer.fr/doc/2008/publication-4316.pdf
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Crustaces profonds captures aux casiers aux Antilles françaises - 1996 ArchiMer
Paulmier, Gerard.
For several years the fishermen of the West Indies have directed their activities towards new fishing grounds, notably the bathyales zones adjacent to island plateaux up to approximately 1000 metres in depth. Explorations carried out since 1989 have shown that diverse crustacean populations could be exploited. However, populations and exploitable stocks are not well known. The use of crustaceans traps as a fishing technique permits the capture of shellfish, shrimps and prawns of which at least six species could have commercial interest. The main objective of this work is do draw up an inventory of the principal commercial species as well as the accompanying species belonging to the subordres Decapoda macrura, anomura, brachyura and to the orders Isopoda...
Tipo: Text Palavras-chave: Crab; Prawn; Shrimp; Depth; Crustaceas; Inventory; French Antillean; Crabe; Langoustine; Crevette; Profond; Crustace; Inventaire; Antilles françaises.
Ano: 1996 URL: http://archimer.ifremer.fr/doc/1996/rapport-1543.pdf
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Culturable fungal diversity of shrimp Litopenaeus vannamei boone from breeding farms in Brazil BJM
Silva,Lidiane Roberta Cruz da; Souza,Odacy Camilo de; Fernandes,Maria José dos Santos; Lima,Débora Maria Massa; Coelho,Rosalie Reed Rodrigues; Souza-Motta,Cristina Maria.
Litopenaeus vannamei, which is the most common shrimp species cultivated in the northeast of Brazil, is very susceptible to microbial diseases, and this consequently affects productivity. There are reports of bacteria, viruses and protozoa in these shrimp, but not fungi. This study aims to isolate and identify fungi present in shrimp Litopenaeus vannamei, and in their nursery waters, at two breeding farms in Brazil. The pathogenic potential of the isolates was assessed through the qualitative detection of proteases and aflatoxin B production. The 146 isolated fungi comprised 46 species. Aspergillus, Penicillium and Furarium were the three most relevant genera and Aspergillus flavus was the predominant species with a total of 33 isolates. Most of the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Shrimp; Fungi; Water; Protease; Aflatoxin B.
Ano: 2011 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000100007
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Decline of genetic variability in a captive population of Pacific white shrimp Penaeus (Litopenaeus) vannamei using microsatellite and pedigree information Electron. J. Biotechnol.
Vela Avitúa,Sergio; Montaldo,Hugo H; Márquez Valdelamar,Laura; Campos Montes,Gabriel R; Castillo Juárez,Héctor.
Background: The objective of this study was to estimate the decline of genetic variability and the changes in effective population size in three shrimp populations. One was a wild population collected at several points in the Mexican Pacific Ocean. The other two populations were different generations (7 and 9) from a captive population selected for growth and survival. Microsatellite markers and pedigree were both used to assess genetic variability and effective population size. Results: Using 26 loci, both captive populations showed a decline in the expected heterozygosity (20%) and allelic diversity indices (48 to 91%) compared to the wild population (P < 0.05). The studied captive populations did not differ significantly from each other regarding...
Tipo: Journal article Palavras-chave: Effective population size; Genetic diversity; Heterozygosity; Microsatellites; Selection; Shrimp.
Ano: 2013 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582013000400009
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Description of two new associated infaunal decapod crustaceans (Axianassidae and Alpheidae) from the tropical eastern Pacific Pap. Avulsos de Zool. (São Paulo)
Anker,Arthur; Lazarus,Juan Felipe.
Two new species of infaunal decapod crustaceans are described based on material collected in Bahía Málaga, Pacific coast of Colombia, in 2009. The mud-shrimp Axianassa darrylfelderi sp. nov. (Axianassidae) appears to be most closely related to A. australis Rodrigues & Shimizu, 1992, A. canalis Kensley & Heard, 1990, and A. jamaicensis Kensley & Heard, 1990. The new species may be distinguished from each of them by a combination of morphological features, mainly on the uropodal exopod, antennal acicle, third maxilliped and first pleonite. The shrimp Leptalpheus canterakintzi sp. nov. (Alpheidae), associated with burrows of A. darrylfelderi sp. nov., undoubtedly represents the eastern Pacific sister species of the western Atlantic L. axianassae...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Decapoda; Shrimp; Mud-shrimp; Infauna; Symbiosis; Axianassidae; Alpheidae; Axianassa; Leptalpheus; Transisthmian species; East Pacific; New species; New record..
Ano: 2015 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0031-10492015000800115
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Development of the shrimp industry in the Western Indian Ocean - a holistic approach of vertical integration, from domestication and biosecurity to product certification ArchiMer
Le Groumellec, Marc; Rigolet, Vincent; Panchayuthapani, Duraisamy; Vandeputte, Marc; Rao, Vemulapalli Manavendra.
The shrimp farming industry in the western Indian Ocean started with Aqualma’s project in 1989, and now several companies farm shrimp in the Mozambique Channel. Despite the remoteness of these projects and their high investment and operating costs, they compete in the global marketplace by efficiently producing high value quality products. To address sustainability and biosecurity issues, Aqualma developed domesticated specific pathogenfree (SPF) broodstock of Penaeus monodon from western Indian Ocean stocks, which have been its exclusive source of post-larvae since 2003. Specific molecular diagnostic tools have been developed for each endemic pathogen detected since 1996, and these are used for routine surveillance of Aqualma’s shrimp stocks along with...
Tipo: Text Palavras-chave: Shrimp; Madagascar; Domestication; Biosecurity; Certification.
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00099/20980/18604.pdf
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Developmental origins of normal and anomalous random right-left asymmetry: lateral inhibition versus developmental error in a threshold trait Naturalis
Palmer, A.R..
Dramatic examples of right-left asymmetry often inspire adaptive explanations, simply because it is hard to imagine how such forms could not be functionally significant. But are conspicuous morphological asymmetries necessarily adaptive? Surprisingly, in some species where direction of asymmetry is random, asymmetry in bilaterally paired traits may arise as a developmental error in a threshold trait. When cases of asymmetry are rare within a species, they are easily recognized as developmental errors. However, as asymmetrical individuals become more common, or if the asymmetry is in a signaling trait, the temptation to advance an adaptive explanation grows, particularly if the asymmetry is not clearly maladaptive. Several models of the ontogeny of...
Tipo: Article / Letter to the editor Palavras-chave: Acari; Adaptive significance; Crabs; Crustacea; Developmental models; Diptera; Flies; Hemiptera; Insecta; Lobsters; Mites; Morphological asymmetry; Polyphenism; Shrimp; Stochastic development; True bugs; 42.21.
Ano: 2012 URL: http://www.repository.naturalis.nl/record/419175
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Differentiation of BP-type baculovirus strains using in situ hybridization ArchiMer
Durand, S; Lightner, Dv; Bonami, Jr.
BP-type viruses infect wild and farmed shrimp species in the Americas and can cause high mortality in larval stages. Histologically, BP disease is characterized by the presence of occlusion bodies (OBs) in the nucleus of hepatopancreatic epithelial cells. By in situ hybridization using different molecular probes, we tested shrimp infected with BP-type viruses collected from several geographical areas. In one shrimp, a case of double infection by 2 different BP-type viruses was noted. This has not been previously reported. The molecular probes recognized only the Pacific strain of BP. This specificity of the probe was confirmed by in situ hybridization tests with some infected shrimp collected from the Atlantic and Pacific coasts. The probes reacted only...
Tipo: Text Palavras-chave: Baculovirus; BP; In situ hybridization; Nonradioactive probes; Shrimp.
Ano: 1998 URL: https://archimer.ifremer.fr/doc/00447/55821/62253.pdf
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