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| Registros recuperados: 57 | |
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| Kantor, Yuri I.; Fedosov, Alexander E.; Snyder, Martin Avery; Bouchet, Philippe. |
| The genus Pseudolatirus Bellardi, 1884, with the Miocene type species Fusus bilineatus Hornes, 1853, has been used for 13 Miocene to Early Pleistocene fossil species and eight Recent species and has traditionally been placed in the fasciolariid subfamily Peristerniinae Tryon, 1880. Although the fossil species are apparently peristerniines, the Recent species were in their majority suspected to be most closely related to Granulifusus Kuroda & Habe, 1954 in the subfamily Fusininae Wrigley, 1927. Their close affinity was confirmed by the molecular phylogenetic analysis of Couto et al. (2016). In the molecular phylogenetic section we present a more detailed analysis of the relationships of 10 Recent Pseudolatirus-like species, erect two new fusinine... |
| Tipo: Text |
Palavras-chave: Gastropod; Fasciolariidae; Pseudolatirus; Molecular phylogeny; New genera; New species; Southwest Pacific. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00620/73240/72754.pdf |
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| Zhang, Wei; Li, Zhun; Mertens, Kenneth; Derrien, Amelie; Pospelova, Vera; Carbonell-moore, M. Consuelo; Bagheri, Siamak; Matsuoka, Kazumi; Shin, Hyeon Ho; Gu, Haifeng. |
| Gonyaulax verior was initially described as Amylax diacantha from Belgian coastal waters a century ago but its detailed morphology needed restudy. Here, we established nine strains of G. verior by germinating cysts or isolating cells from localities from the European Atlantic to the Caspian Sea and the Pacific Ocean. Both cyst and thecal morphology were examined by light and scanning electron microscopy. SSU, LSU and/or ITS-5.8S rRNA gene sequences were obtained from all strains. Cells of G. verior have a plate formula of Po, 4′, 2a, 6-7′′, 6C, 6S, 6′′′, 1p, 1′′′′ with an L-type ventral organisation, characterised by two either straight or curved antapical horns of variable length. Cysts of G. verior are oval, smooth and contain one or two yellow... |
| Tipo: Text |
Palavras-chave: Amylax diacantha; Cysts; Dinoflagellate; Gonyaulax longispina; Molecular phylogeny. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00621/73347/72625.pdf |
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| Silberfeld, Thomas; Bittner, Lucie; Fernandez-garcia, Cindy; Cruaud, Corinne; Rousseau, Florence; De Reviers, Bruno; Leliaert, Frederik; Payri, Claude E.; De Clerck, Olivier. |
| The brown algal genus Padina (Dictyotales, Phaeophyceae) is distributed worldwide in tropical and temperate seas. Global species diversity and distribution ranges, however, remain largely unknown. Species-level diversity was reassessed using DNA-based, algorithmic species delineation techniques based on cox3 and rbcL sequence data from 221 specimens collected worldwide. This resulted in estimates ranging from 39 to 61 putative species (ESUs), depending on the technique as well as the locus. We discuss the merits, potential pitfalls, and evolutionary and biogeographic significance of algorithmic species delineation. We unveil patterns whereby ESUs are in all but one case restricted to either the Atlantic or Indo-Pacific Ocean. Within ocean basins we find... |
| Tipo: Text |
Palavras-chave: Biogeography; Brown algae; Dictyotales; General mixed yule-coalescent model; Molecular phylogeny; Padina; Phaeophyceae; Species delineation. |
| Ano: 2013 |
URL: https://archimer.ifremer.fr/doc/00144/25568/23716.pdf |
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| Martin-lescanne, Julie; Rousseau, Florence; De Reviers, Bruno; Payri, Claude; Couloux, Arnaud; Cruaud, Corinne; Le Gall, Line. |
| Molecular phylogenies inferred from rbcL sequences including 39 representative members of the Laurencia complex confirm the four genera currently recognised within the complex: Laurencia sensu stricto, Osmundea, Chondrophycus and the recently described genus Palisada. Furthermore, Palisada poiteaui was resolved as a fifth independent lineage suggesting that the complex is actually composed of five rather than four genera. Palisada poiteaui is the type species of the subgenus Yuzurua, and elevation of this subgenus to generic rank is proposed. This new genus allied strongly with Laurencia s.s. However, the other intergeneric relationships were not well supported, suggesting that rbcL sequences may not have sufficient signal to clarify infrageneric... |
| Tipo: Text |
Palavras-chave: Chondrophycus; Laurencia complex; Molecular phylogeny; Osmundea; Palisada; RbcL; Yuzurua poiteaui; Yuzurua stat; Nov. |
| Ano: 2010 |
URL: https://archimer.ifremer.fr/doc/00202/31324/29729.pdf |
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| Saburova, Maria; Chomérat, Nicolas. |
| A new thecate, photosynthetic, sand‐dwelling marine dinoflagellate, Laciniporus arabicus gen. et sp. nov., is described from the subtidal sediments of the Omani coast in the Arabian Sea, northern Indian Ocean, based on detailed morphological and molecular data. Cells of L. arabicus are small (16.2‐30.1 μm long and 13.1‐23.2 μm wide), dorsoventrally compressed, with a small apical flap‐shaped projection pointing to the left. The thecal plate pattern is distinguished by minute first precingular plate and sulcus, which extends into the epitheca, with large anterior and right sulcal plates. The Kofoidian thecal tabulation is Po, X, 4′, 2a, 7′′, 6c, 6s, 5′′′, 2′′′′. Morphologically, the revealed plate pattern has an affinity to the Peridiniales, and LSU rDNA... |
| Tipo: Text |
Palavras-chave: Arabian Sea; Benthic dinoflagellates; Dinophyceae; Laciniporus arabicus; Molecular phylogeny; Morphology; Oman; Peridiniales; Taxonomy. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00454/56614/58315.pdf |
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| Groenenberg, D.S.J.; Subai, P.; Gittenberger, E.. |
| A new starting-point in Ariantinae systematics is presented by combining data on traditional shell morphology and genital anatomy, with phylogeny reconstructions based on DNA sequence data. For nearly all genera and subgenera one or more shells are depicted and drawings of the proximal part of the genital organs are shown to illustrate the morphological diversification within the subfamily. For as much as our material allowed it, partial sequences are presented for Histone H3 (H3), Cytochrome c oxidase subunit I (COI), Cytochrome B (CytB) and 16S ribosomal RNA (16S). Some of the allegedly speciose genera like Chilostoma and Campylaea (Zilch, 1960) do not represent monophyletic groups of species, whereas most of the remaining nominal taxa (e.g. Causa,... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Ariantinae; Classification; Molecular phylogeny; Morphology. |
| Ano: 2016 |
URL: http://www.repository.naturalis.nl/record/607662 |
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| Voglmayr, H.; Jaklitsch, W.M.. |
| Following the abolishment of dual nomenclature, Stilbospora is recognised as having priority over Prosthecium. The type species of Stilbospora, S. macrosperma, is the correct name for P. ellipsosporum, the type species of Prosthecium. The closely related genus Stegonsporium is maintained as distinct from Stilbospora based on molecular phylogeny, morphology and host range. Stilbospora longicornuta and S. orientalis are described as new species from Carpinus betulus and C. orientalis, respectively. They differ from the closely related Stilbospora macrosperma, which also occurs on Carpinus, by longer, tapering gelatinous ascospore appendages and by distinct LSU, ITS rDNA, rpb2 and tef1 sequences. The asexual morphs of Stilbospora macrosperma, S. longicornuta... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Alnecium; Calospora; Calosporella; ITS; LSU; Molecular phylogeny; Phaeodiaporthe; Rpb2; Systematics; Tef1. |
| Ano: 2014 |
URL: http://www.repository.naturalis.nl/record/532218 |
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| Reijnen, B.T.; Hoeksema, B.W.; Gittenberger, E.. |
| Ovulid gastropods and their octocoral hosts were collected along the leeward coast of Curaçao, Netherlands Antilles. New molecular data of Caribbean and a single Atlantic species were combined with comparable data of Indo-Pacific Ovulidae and a single East-Pacific species from GenBank. Based on two DNA markers, viz. CO-I and 16S, the phylogenetic relationships among all ovulid species of which these data are available are reconstructed. The provisional results suggest a dichotomy between the Atlantic and the Indo-Pacific taxa. Fully grown Simnialena uniplicata closely resembles juvenile Cyphoma gibbosum conchologically. Cymbovula acicularis and C. bahamaensis might be synonyms. The assignments of Caribbean host species for Cyphoma gibbosum, C.... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Anthozoa; Alcyonacea; Caribbean; Curaçao; Molecular phylogeny; Symbiosis; 42.73. |
| Ano: 2010 |
URL: http://www.repository.naturalis.nl/record/336926 |
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| Hsu, K.-M.; Tsai, J.-L.; Chen, M.-Y.; Ku, H.-M.; Liu, S.-C.. |
| The phylogenetic relationships of Dioscorea, including sections Botryosicyos, Combilium, Enantiophyllum, Lasiophyton, Opsophyton, Shannicorea and Stenophora, are reconstructed with chloroplast trnL-F, matK, rbcL and atpB-rbcL sequence data, covering a total of 72 accessions including 48 ingroup species and five outgroup species from East and Southeast Asia. The seven Asian sections do reflect the genetic relationships among the species that they include. In summary, D. sect. Combilium and sect. Shannicorea are recognized as closely related sections with moderate support. The results also support Burkills treatment of subsect. Euopsophyton (D. bulbifera) as sect. Opsophyton and subsect. Macrourae (D. sansibarensis) as sect. Macroura. In addition, there is a... |
| Tipo: Article / Letter to the editor |
Palavras-chave: AtpB-rbcL; Dioscorea; MatK; Molecular phylogeny; RbcL; TrnL-F. |
| Ano: 2013 |
URL: http://www.repository.naturalis.nl/record/524972 |
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| Consiglio, G.; Setti, L.; Thorn, R.G.. |
| Four new species of Hohenbuehelia (Fungi: Pleurotaceae) are described in the group of Hohenbuehelia atrocoerulea and Hohenbuehelia grisea. Hohenbuehelia algonquinensis, found on Pinus in Ontario, Canada, may be distinguished macroscopically from bluish collections of H. atrocoerulea and watery grey-brown collections of H. grisea by its coal-black pileus. Hohenbuehelia canadensis, on or associated with Pinus in both Ontario and Alberta, Canada, and Hohenbuehelia nimueae, on Salix in Ontario and Abies in Wyoming, USA, have similarly dark fruiting bodies and were previously misidentified as H. approximans (which we treat as a synonym of H. grisea), H. atrocoerulea, H. mustialensis or H. nigra. The latter species is shown to be a member of Resupinatus, despite... |
| Tipo: Article / Letter to the editor |
Palavras-chave: 28S; 5 new taxa; Barcoding; Mushrooms; Molecular phylogeny; Nematophagous; Resupinatus niger. |
| Ano: 2018 |
URL: http://www.repository.naturalis.nl/record/659253 |
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| Wang, Q.-M.; Theelen, B.; Groenewald, M.; Bai, F.-Y.; Boekhout, T.. |
| Ustilaginomycotina (Basidiomycota, Fungi) has been reclassified recently based on multiple gene sequence analyses. However, the phylogenetic placement of two yeast-like genera Malassezia and Moniliella in the subphylum remains unclear. Phylogenetic analyses using different algorithms based on the sequences of six genes, including the small subunit (18S) ribosomal DNA (rDNA), the large subunit (26S) rDNA D1/D2 domains, the internal transcribed spacer regions (ITS 1 and 2) including 5.8S rDNA, the two subunits of RNA polymerase II (RPB1 and RPB2) and the translation elongation factor 1-α (EF1-α), were performed to address their phylogenetic positions. Our analyses indicated that Malassezia and Moniliella represented two deeply rooted lineages within... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Fungi; Molecular phylogeny; Smuts; Taxonomy; Yeasts. |
| Ano: 2014 |
URL: http://www.repository.naturalis.nl/record/531911 |
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| Bonato, L.; Minelli, A.; Drago, L.; Pereira, L.A.. |
| The centipedes of the clade Epimorpha change slightly during post-embryonic growth but there is huge variation between species in the maximum body size. New specimens of the rarely collected Neotropical genus Dinogeophilus provide further evidence that this genus comprises the smallest species of the Epimorpha, with a recorded maximum length of 5.5 mm. Up to now Dinogeophilus has been invariantly classified in Geophilidae but different sources of evidence (examination by SEM, cladistic evaluation of morphology, similarity and phylogenetic analysis of molecular data) agree on a very different phylogenetic hypothesis: Dinogeophilus is actually a derived lineage of Schendylidae, only distantly related to Geophilidae, and possibly belong to a mainly... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Geophilidae; Miniaturization; Molecular phylogeny; Paedomorphosis; Schendylidae; 42.74. |
| Ano: 2015 |
URL: http://www.repository.naturalis.nl/record/578403 |
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| Grum-Grzhimaylo, A.A.; Debets, A.J.M.; Diepeningen, A.D. van; Georgieva, M.L.; Bilanenko, E.N.. |
| In this study we reassess the taxonomic reference of the previously described holomorphic alkaliphilic fungus Heleococcum alkalinum isolated from soda soils in Russia, Mongolia and Tanzania. We show that it is not an actual member of the genus Heleococcum (order Hypocreales) as stated before and should, therefore, be excluded from it and renamed. Multi-locus gene phylogeny analyses (based on nuclear ITS, 5.8S rDNA, 28S rDNA, 18S rDNA, RPB2 and TEF1-alpha) have displayed this fungus as a new taxon at the genus level within the family Plectosphaerellaceae, Hypocreomycetidae, Ascomycota. The reference species of actual Heleococcum members showed clear divergence from the strongly supported Heleococcum alkalinum position within the Plectosphaerellaceae, sister... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Alkaliphilic fungi; Growth; Heleococcum alkalinum; Molecular phylogeny; Scanning electron microscopy; Taxonomy. |
| Ano: 2013 |
URL: http://www.repository.naturalis.nl/record/532154 |
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| Voglmayr, H.; Castlebury, L.A.; Jaklitsch, W.M.. |
| Molecular phylogenetic analyses of ITS-LSU rDNA sequence data demonstrate that Melanconis species occurring on Juglandaceae are phylogenetically distinct from Melanconis s.str., and therefore the new genus Juglanconis is described. Morphologically, the genus Juglanconis differs from Melanconis by light to dark brown conidia with irregular verrucae on the inner surface of the conidial wall, while in Melanconis s.str. they are smooth. Juglanconis forms a separate clade not affiliated with a described family of Diaporthales, and the family Juglanconidaceae is introduced to accommodate it. Data of macro- and microscopic morphology and phylogenetic multilocus analyses of partial nuSSU-ITS-LSU rDNA, cal, his, ms204, rpb1, rpb2, tef1 and tub2 sequences revealed... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Ascomycota; Diaporthales; Molecular phylogeny; New species; Pathogen; Systematics. |
| Ano: 2017 |
URL: http://www.repository.naturalis.nl/record/622492 |
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| Merckx, V.; Schols, P.; Maas - Van de Kamer, H.; Maas, P.; Huymans, S.; Smets, E.. |
| The mycoheterotrophic Burmanniaceae are one of the three families currently recognized in the order Dioscoreales. Phylogenetic inference using nucleotide sequences of the nuclear 18S rDNA region and the mitochondrial nad1 b-c intron revealed two well-supported, major lineages within the family, corresponding to the two tribes recognized in the family: Burmannieae and Thismieae. All data supported a strong relationship between Thismieae and Tacca (Dioscoreaceae) making both Burmanniaceae and Dioscoreaceae polyphyletic. The three largest Burmanniaceae genera, Burmannia, Gymnosiphon, and Thismia, are paraphyletic. The splitting of Burmanniaceae into Burmannieae and Thismieae indicates two independent origins of mycoheterotrophy and correlated loss of... |
| Tipo: Article / Letter to the editor |
Palavras-chave: 18S rDNA; Burmanniaceae; Dioscoreales; Molecular phylogeny; Mycoheterotrophy; Nad1 b-c intron; Thismiaceae; 42.48. |
| Ano: 2006 |
URL: http://www.repository.naturalis.nl/record/422338 |
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| Skrede, I.; Carlsen, T.; Schumacher, T.. |
| Helvella is a widespread, speciose genus of large apothecial ascomycetes (Pezizomycete: Pezizales) that are found in terrestrial biomes of the Northern and Southern Hemispheres. This study represents a beginning on assessing species limits and applying correct names for Helvella species based on type material and specimens in the university herbaria (fungaria) of Copenhagen (C), Harvard (FH) and Oslo (O). We use morphology and phylogenetic evidence from four loci – heat shock protein 90 (hsp), translation elongation factor alpha (tef), RNA polymerase II (rpb2) and the nuclear large subunit ribosomal DNA (LSU) – to assess species boundaries in an expanded sample of Helvella specimens from Europe. We combine the morphological and phylogenetic information... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Molecular phylogeny; Pezizales; Systematics. |
| Ano: 2017 |
URL: http://www.repository.naturalis.nl/record/636691 |
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| Scarpa, F.; Cossu, P.; Lai, T.; Sanna, D.; Curini-Galletti, M.; Casu, M.. |
| Given the pending biodiversity crisis, species delimitation is a critically important task in conservation biology, but its efficacy based on single lines of evidence has been questioned as it may not accurately reflect species limits and relationships. Hence, the use of multiple lines of evidence has been portrayed as a means to overcome identification issues arising from gene/ species tree discordance, morphological convergence or recent adaptive radiations. Here, the integrative taxonomic approach has been used to address the study of the Monocelis lineata species complex. The taxonomic resolution of the complex is challenging, as the species lacks sclerotised copulatory structures, which as a rule of thumb aid identification in Proseriata. Eighteen... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Integrative taxonomic approach; Meiofauna conservation; Molecular dating; Molecular phylogeny; Molecular taxonomy; RDNA 18S-28S. |
| Ano: 2016 |
URL: http://www.repository.naturalis.nl/record/607690 |
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| Minnis, A.M.; Kennedy, A.H.; Grenier, D.B.; Palm, M.E.; Rossman, A.Y.. |
| The core species of the family Planistromellaceae are included in the teleomorphic genera Planistroma and Planistromella and the connected anamorphic, coelomycetous genera Alpakesa, Kellermania, and Piptarthron. These genera have been defined primarily on the basis of ascospore septation or number of conidial appendages. Due to a lack of DNA sequence data, phylogenetic placement of these genera within the Dothideomycetes, evaluation of monophyly, and questions about generic boundaries could not be adequately addressed in the past. Isolates of nearly all of the known species in these genera were studied genetically and morphologically. DNA sequence data were generated for the nSSU, ITS, nLSU, and RPB1 markers and analysed phylogenetically. These results... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Agavaceae; Ascomycota; Asparagaceae; Botryosphaeriaceae; Botryosphaeriales; Coelomycetes; Dothideomycetes; Molecular phylogeny; Planistromellaceae; Septoplaca; Taxonomy. |
| Ano: 2012 |
URL: http://www.repository.naturalis.nl/record/532255 |
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| Registros recuperados: 57 | |
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