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Registros recuperados: 160
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Genetic structure of the snakehead murrel, Channa striata (channidae) based on the cytochrome c oxidase subunit I gene: influence of historical and geomorphological factors Genet. Mol. Biol.
Jamaluddin,Jamsari Amirul Firdaus; Pau,Tan Min; Siti-Azizah,Mohd Nor.
Nucleotide sequences of a partial cytochrome c oxidase subunit I gene were used to assess the manner in which historical processes and geomorphological effects may have influenced genetic structuring and phylogeographic patterns in Channa striata. Assaying was based on individuals from twelve populations in four river systems, which were separated into two regions, the eastern and western, of the biodiversely rich state of Perak in central Peninsular Malaysia. In 238 specimens, a total of 368-bp sequences with ten polymorphic sites and eleven unique haplotypes were detected. Data on all the twelve populations revealed incomplete divergence due to past historical coalescence and the short period of separation. Nevertheless, SAMOVA and F ST revealed...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Channa striata; MtDNA COI; Phylogeography; Population structure.
Ano: 2011 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572011000100026
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Intraspecific variation and population structure of the Velvetbean Caterpillar, Anticarsia gemmatalis Hübner, 1818 (Insecta: Lepidoptera: Noctuidae) Genet. Mol. Biol.
Sosa-Gómez,Daniel R..
The velvetbean caterpillar (VBC), Anticarsia gemmatalis Hübner, 1818 (Insecta: Lepidoptera: Noctuidae), is one of the most important New World soybean agro-ecosystems pests, occurring from 40° N in the USA to 39° S in Argentina. Information on the migration patterns of the VBC moth may be important for managing the resistance of VBC populations to insecticides or plants carrying the Bacillus thuringiensis insecticide genes, especially since sedentary populations have a higher potential to became resistant than migratory populations. We studied intraspecific variations of geographically distinct VBC populations in order to determine the genetic distance between them and to assess the variability of VBC populations from near the city of Londrina (Paraná (PR)...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Molecular marker; RAPD; Gene flow; Soybean pest; Population structure.
Ano: 2004 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572004000300012
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Phylogeographic history of South American populations of the silky anteater Cyclopes didactylus (Pilosa: Cyclopedidae) Genet. Mol. Biol.
Coimbra,Raphael Teodoro Franciscani; Miranda,Flávia Regina; Lara,Camila Clozato; Schetino,Marco Antônio Alves; Santos,Fabrício Rodrigues dos.
Abstract Cyclopes didactylus, commonly called silky anteater, is the smallest and least studied of the anteaters. It is an arboreal species occurring in rainforests, ranging from southern Mexico to Central and South America, with an apparently disjoint distribution between Amazon and Atlantic rainforests in Brazil. Although seven subspecies are recognized, little is known about its geographical variation. Thus, to evaluate the population dynamics and evolutionary history of the South American silky anteater, we analyzed 1542 bp sequences of the mitochondrial control region (CR), COI and Cyt-b genes of 32 individuals. Haplotype network, AMOVA and molecular dating analyses were performed and identified seven geographic clusters. The split of lineages...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Xenarthra; Mitochondrial DNA; Population structure; Molecular dating; South America.
Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000100040
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Сезонная динамика численности и размерно-возрастного состава гемипопуляции марит Helicometra fasciata (Rud., 1819) в прибрежной зоне юго-западного Крыма. IBSS Repository
Корнийчук, Ю. М..
Установлено, что парагемипопуляция марит Helicometra fasciata в руленах Symphodus tinca испытывает на протяжении года незначительные флуктуации численности, что обусловлено длительным (примерно год) сроком жизни марит в сочетании с круглогодичным поступлением ювенильных паразитов в популяцию хозяина. Такая схема динамики численности обеспечивает относительную независимость паразитарной системы H. fasciata от межгодовых колебаний абиотических условий и, следовательно, ее устойчивость.
Tipo: Journal Contribution Palavras-chave: Helicometra fasciata; Мариты; Численность; Размерно-возрастной состав; Чёрное море; Population structure; Seasonal changes; Symphodus tinca; Популяційна структура; Сезонні зміни.
Ano: 2008 URL: http://repository.ibss.org.ua/dspace/handle/99011/811
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Популяционная структура и условия формирования промыслового запаса хамсы Engraulis encrasicolus у побережья Крыма в осенне-зимний сезон 200/2008 гг. IBSS Repository
Зуев, Г. В.; Гуцал, Д. К.; Репетин, Л. Н.; Салехова, Л. П.; Мельникова, Е. Б.; Бондарев, В. А.; Мурзин, Ю. Л..
С помощью индекса отолитов установлена принадлежность хамсы, зимовавшей в 2007/2008 гг. у юго-западного и южного побережья Крыма, к черноморской популяции. Проанализирована динамика размерно-возрастной и половой структуры популяции в период зимовки, а также динамика промысла. Обсуждаются гидрометеорологические факторы, обусловившие массовую осеннюю миграцию хамсы к черноморскому побережью Крыма.
Tipo: Journal Contribution Palavras-chave: Хамса; Улов; Запас; Популяционная структура; Отолит; Чёрное море; Anchovy; Catch; Stock; Population structure; Otolith; Black Sea; Популяційна структура; Отоліт; Чорне море.
Ano: 2009 URL: http://repository.ibss.org.ua/dspace/handle/99011/841
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Мейобентосное население прибрежных наносов региона Севастополя (Чёрное море) IBSS Repository
Гусева, Е. В..
Рассмотрены состав и численность мейобентосного сообщества прибрежных наносов на полигонах в акватории Севастополя в летние сезоны 2001 – 2003 гг. Качественно-количественные характеристики мейобентоса наносов урезной зоны б. Круглая в 2003 г. сопоставлены с таковыми в пробах донных осадках с глубин 1,5 – 2 м за этот же период.
Tipo: Journal Contribution Palavras-chave: Meiobenthos; Population density; Population structure; Population structure; Meiobenthos; Population density; Http://aims.fao.org/aos/agrovoc/c_6115; Http://aims.fao.org/aos/agrovoc/c_12481; Http://aims.fao.org/aos/agrovoc/c_6112.
Ano: 2007 URL: http://repository.ibss.org.ua/dspace/handle/99011/582
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Microhabitat preferences of the freshwater prawn Macrobrachium jelskii (Decapoda: Palaemonidae) Iheringia, Sér. Zool.
Silva,Jersei N.; Oliveira,Guilherme de; Rocha,Sérgio S. da.
ABSTRACT We analyzed the microhabitat preferences of Macrobrachium jelskii (Miers, 1877) males and females inhabiting an urban water reservoir in Cruz das Almas, Bahia, Brazil. Prawns were collected monthly, from March 2015 to February 2016, in three microhabitats, using a sieve. Each microhabitat was dominated by one macrophyte species: Eleocharis sp. (M1), Cabomba sp. (M2), and Nymphaea sp. (M3). The prawns were measured (carapace length), and categorized as juvenile males, adult males, juvenile females, non-ovigerous adult females and ovigerous adult females. An analysis of variance (ANOVA) was used to compare the number and size of individuals. The sex ratio and frequency of ovigerous females in the three microhabitats were also calculated. The sex...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Macrophyte; Population structure; Reproduction; Spatial distribution.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0073-47212019000100227
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Morphometric and genetic differentiation among populations of Eupemphix nattereri (Amphibia, Anura, Leiuperidae) from central Brazil Iheringia, Sér. Zool.
Silva,Daniela de M. e; Cruz,Aparecido D. da; Bastos,Rogério P.; Telles,Mariana P. de C.; Diniz-Filho,José Alexandre F..
To assess genetic structure and phenotypic diversity of Eupemphix nattereri Steindachner, 1863, morphometric and molecular analyses were carried out for nine populations from the State of Goiás. A total of 11 morphometric traits were evaluated and genetic information was estimated using RAPD markers. Genetic and phenotypic distances were determined as a function of geographical origin. Correlation among genetic, morphometric, micro, and macroenviromental were analyzed by the Mantel test. Genetic data indicated high levels of genetic diversity (Φst= 0.3) among the nine populations. Mantel tests did not reveal a significant positive correlation between genetic and geographical distances, indicating that locally geographical populations were not genetically...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Eupemphix nattereri; Morphology; RAPD markers; Gene flow; Population structure.
Ano: 2008 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0073-47212008000400013
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Ecology and natural history of Akodon lindberghi (Rodentia, Sigmodontinae) in southeastern Brazil Iheringia, Sér. Zool.
Queirolo,Diego; Granzinolli,Marco A. M..
We studied the ecology and natural history of the globally threatened and poorly known Akodon lindberghi Hershkovitz, 1990 in Parque Nacional da Serra da Canastra (PNSC) and Juiz de Fora (JF), southeastern Brazil. From November 1998 to September 2001 a total of 131 individuals were captured in wire-cage live-traps and 52 by pitfalls traps. They were all marked and released at the site. The largest abundances were registered during the dry season, and most of the captures occurred in open habitats. The mean body mass of the two populations was significantly different (18.1 g at PNSC versus 13.1 g at JF; H = 46.2678, g.l.=2, p<0.001). In PNSC, individuals were reproductively active from August to February, and juveniles were present from May to August....
Tipo: Info:eu-repo/semantics/article Palavras-chave: Akodon lindberghi; Reproduction; Abundance; Body mass; Population structure.
Ano: 2009 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0073-47212009000200011
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Population dynamics of the pea crab Austinixa aidae (Brachyura, Pinnotheridae): a symbiotic of the ghost shrimp Callichirus major (Thalassinidea, Callianassidae) from the southwestern Atlantic Iheringia, Sér. Zool.
Peiró,Douglas F; Mantelatto,Fernando L.
The Pinnotheridae family is one of the most diverse and complex groups of brachyuran crabs, many of them symbionts of a wide variety of invertebrates. The present study describes the population dynamics of the pea crab Austinixa aidae (Righi, 1967), a symbiont associated with the burrows of the ghost shrimp Callichirus major (Say, 1818). Individuals (n = 588) were collected bimonthly from May, 2005 to September, 2006 along a sandy beach in the southwestern Atlantic, state of São Paulo, Brazil. Our data indicated that the population demography of A. aidae was characterized by a bimodal size-frequency distribution (between 2.0 and 4.0 mm and between 8.0 and 9.0 mm CW) that remained similar throughout the study period. Sex ratio does not differ significantly...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Population structure; Pinnotherids; Intertidal zone; Symbiosis; Brazil.
Ano: 2011 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0073-47212011000100001
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Population dynamic of Sesarma rectum (Crustacea, Brachyura, Sesarmidae) from a muddy flat under human impact, Paraty, Rio de Janeiro, Brazil Iheringia, Sér. Zool.
Silva,Stella Maris Januário da; Hirose,Gustavo Luis; Negreiros-Fransozo,Maria Lucia.
A population of Sesarma rectum Randall, 1840 under the influence of human impact was studied. Monthly sampling (CPUE, two people during 30 min) took place from August/2001 to July/2002 at an impacted muddy flat in Paraty city, State of Rio de Janeiro (23º13'S, 44º42'W). At the laboratory, specimens were classified by sex and measured with a vernier caliper (0.01 mm). The size at the beginning of the sexual maturity was obtained by means of different techniques: in the case of males it was used the allometric procedure and the macroscopic analysis of gonads wile for females, the size of the smallest ovigerous female was also considered. The population structure was evaluated by means the analysis of the variations in the modes of the size frequency...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Sexual maturity; Allometric growth; Population structure; Fecundity.
Ano: 2007 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0073-47212007000200010
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A HMM-based model to geolocate pelagic fish from high-resolution individual temperature and depth histories: European sea bass as a case study ArchiMer
Woillez, Mathieu; Fablet, Ronan; Tran-thanh Ngo,; Lalire, Maxime; Lazure, Pascal; De Pontual, Helene.
Numerous methods have been developed to geolocate fish from data storage tags. Whereas demersal species have been tracked using tide-driven geolocation models, pelagic species which undertake extensive migrations have been mainly tracked using light-based models. Here, we present a new HMM-based model that infers pelagic fish positions from the sole use of high-resolution temperature and depth histories. A key contribution of our framework lies in model parameter inference (diffusion coefficient and noise parameters with respect to the reference geophysical fields—satellite SST and temperatures derived from the MARS3D hydrodynamic model), which improves model robustness. As a case study, we consider long time series of data storage tags (DSTs) deployed on...
Tipo: Text Palavras-chave: Fish movement; Archival tagging; Migration; Population structure; Hidden Markov Model (HMM); State-space model.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00300/41097/40270.pdf
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Dispersion larvaire et cycle de vie dans les environnements hydrothermaux profonds : le cas de Rimicaris exoculata et d'espèces proches ArchiMer
Hernandez Avila, Ivan.
Deep-water hydrothermal vent host high-biomass communities based on chemoautotrophy supported by the metabolic activity of free-living and symbiotic bacteria associated to invertebrates, especially megafauna. Knowledge on the mechanisms of dispersal and the life cycle of vent species is essential to our understanding of the vent communities in terms of distribution, structure and temporal variation. In this study, I present some advances regarding the dispersal and life cycle of a dominant species of the Mid-Atlantic Ridge (MAR) vent ecosystems, the alvinocaridid shrimp Rimicaris exoculata, and other related species. The methodological approaches applied include morphological descriptions of larvae, analysis of population biology and reproduction, and...
Tipo: Text Palavras-chave: Sources hydrothermales profondes; Cycle de vie; Structure de population; Symbiose; Crevettes Alvinocarididae; Deep-water hydrothermal vents; Life cycle; Population structure; Reproduction; Dispersal; Symbiosis; Speciation.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00498/60927/64321.pdf
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La Baie de Seine: Peuplements et especes benthiques en regime perturbe ArchiMer
Cabioch, L; Retiere, C.
The waters of the Seine River are polluted by urban, industrial and agricultural effluents. In addition direct industrial wastes inputs are emptied into the estuary. Within the limits of the Seine Bay program it was not possible to research pollution impacts on every estuarine ecosystem link; so only benthos have been studied. To take time response of organisms into account, the authors have defined indicators or quantitative evaluation of parameters, reflecting physiological state. They have studied population fluctuations caused by natural or man induced effects.
Tipo: Text Palavras-chave: Hydrodynamics; Population dynamics; Population structure; Bioaccumulation; Pollution effects; Marine pollution; Ecosystem disturbance; Benthos.
Ano: 1985 URL: http://archimer.ifremer.fr/doc/1985/acte-1304.pdf
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Performance of maximum likelihood mixture models to estimate nursery habitat contributions to fish stocks: a case study on sea bream Sparus aurata ArchiMer
Niklitschek, Edwin J.; Darnaude, Audrey M..
Background: Mixture models (MM) can be used to describe mixed stocks considering three sets of parameters: the total number of contributing sources, their chemical baseline signatures and their mixing proportions. When all nursery sources have been previously identified and sampled for juvenile fish to produce baseline nursery-signatures, mixing proportions are the only unknown set of parameters to be estimated from the mixed-stock data. Otherwise, the number of sources, as well as some/all nursery-signatures may need to be also estimated from the mixed-stock data. Our goal was to assess bias and uncertainty in these MM parameters when estimated using unconditional maximum likelihood approaches (ML-MM), under several incomplete sampling and...
Tipo: Text Palavras-chave: Otolith chemistry; Mixture models; Mixed stocks; Mixing proportions; Mixing models; Stock identification; Stock structure; Fish stocks; Population structure; Sparus aurata.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00625/73753/74388.pdf
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Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era ArchiMer
Gagnaire, Pierre-alexandre; Broquet, Thomas; Aurelle, Didier; Viard, Frederique; Souissi, Ahmed; Bonhomme, Francois; Arnaud-haond, Sophie; Bierne, Nicolas.
Estimating the rate of exchange of individuals among populations is a central concern to evolutionary ecology and its applications to conservation and management. For instance, the efficiency of protected areas in sustaining locally endangered populations and ecosystems depends on reserve network connectivity. The population genetics theory offers a powerful framework for estimating dispersal distances and migration rates from molecular data. In the marine realm, however, decades of molecular studies have met limited success in inferring genetic connectivity, due to the frequent lack of spatial genetic structure in species exhibiting high fecundity and dispersal capabilities. This is especially true within biogeographic regions bounded by well-known...
Tipo: Text Palavras-chave: Connectivity; Gene flow; Marine conservation; Population genomics; Population structure.
Ano: 2015 URL: http://archimer.ifremer.fr/doc/00275/38592/37120.pdf
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Reproduction and growth of the deep-sea brittlestar ophiura-ljungmani (lyman) ArchiMer
Tyler, Pa; Gage, Jd.
Reproductive biology and population dynamics of Ophiura Ijungmani were studied by measuring disk diameters and by examining oocyte size-frequencies and fecundity from a sequential seasonal series of large samples from a 2900 m deep Permanent Station in the Rockall Trough (Northeast Atlantic). Egg size (max. 90 !lm) and fecundity (up to 57000 eggs per individual) suggests indirect planktotrophic development, while a clear annual cycle in gametogenesis, with probably synchronous spawning in JanuaryFebruary, confirms a marked seasonality that is also seen as an annual, summertime set of postlarvae on to the bottom. Analysis of size structure of the population indicates annually discrete year classes with a maximum longevitv of around 10 years. lndividuals...
Tipo: Text Palavras-chave: Ovocytes; Fécondité; Structure de la répartition des classes de tailles; Recrutement; Capacité de survie; Oocytes; Fecundity; Population structure; Recruitment; Survivorship.
Ano: 1980 URL: http://archimer.ifremer.fr/doc/00323/43424/43087.pdf
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Bathymetric distribution and growth rates of Eunicella verrucosa (Cnidaria: Gorgoniidae) populations along the Marseilles coast (France) ArchiMer
Sartoretto, Stephane; Francour, Patrice.
Gorgonians are important organisms in the Mediterranean Sea, where they form rocky benthic communities. Four main species (3 Holaxonia and 1 Scleraxonia) are predominant in infra- and circalittoral communities of the northwestern Mediterranean basin. Other species, such as Eunicella verrucosa (Pallas, 1766), are more rarely encountered. The expansion to unusually shallow bathymetric levels has been noted in the region of Marseilles (France) (between 20 and 40 m depth). A ten-year monitoring of colonies was used to assess the growth rate according to age (size): from 3.33 cm year(-1) (height <15 cm) to 0.62 cm year(-1) (height >40 cm).
Tipo: Text Palavras-chave: Eunicella verrucosa; Mediterranean Sea; Growth rate; Population structure.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00087/19859/17508.pdf
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Reproductive biology of Alvinocarls muricola (Decapoda : Caridea : Alvinocarididae) from cold seeps in the Congo Basin ArchiMer
Ramirez Llodra, Eva; Segonzac, Michel.
The caridean shrimp Alvinocaris niuricola has been observed forming high density populations over mussel beds on the giant pockmark cold seep site Regab in the Gulf of Guinea at 3150 m depth. Samples were collected using the ROV Victor 6000, a beam trawl and a TV grab from two sites. The specimens Were sexed and measured for population structure analysis. In one sample the sex ratio was 1:1, but the other sample had a sex ratio significantly biased towards females. The maximum size of females is larger than males. A sub-sample was used for gametogenesis and fecundity analysis. The oogenesis and spermatogenesis of A. muricola is characteristic of caridean shrimps. The oogonia proliferate from the germinal epithelium and develop into previtellogenic oocytes...
Tipo: Text Palavras-chave: Reproduction biology; Oogenesis; Sex ratio; Population structure; Caridean shrimp.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-2317.pdf
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Assessment of sea bass (Dicentrarchus labrax, L.) stock delimitation in the Bay of Biscay and the English Channel based on mark-recapture and genetic data ArchiMer
Fritsch, Manon; Morizur, Yvon; Lambert, E; Bonhomme, Francois; Guinand, B.
Sea bass (Dicentrarchus labrax) fisheries are becoming increasingly abundant along eastern Atlantic coastlines, especially in the ICES sub-areas IV, VII and VIII, but they are still not being managed by the European Union TAC (Total Allowed Catches) system. Scientific information about these sea bass stocks is limited, but the fishery is currently managed or modelled based upon these data, separated into the ICES divisions. Clearly, failure to manage satisfactorily the fishery may lead to a decline in stocks. We therefore investigated the structure of Atlantic sea bass populations at eight microsatellite loci in the Bay of Biscay and the English Channel and, additionally, at five selected loci in Ireland and Scotland. Genetic data showed no significant...
Tipo: Text Palavras-chave: Population structure; Microsatellite loci; Tagging; Mark recapture; Dicentrarchus labrax.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/publication-2401.pdf
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