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Temperature Measurements from Surface Drifters ArchiMer
Reverdin, G.; Boutin, J.; Martin, N.; Lourenco, A.; Bouruet-aubertot, P.; Lavin, A.; Mader, J.; Blouch, P.; Rolland,; Gaillard, Fabienne; Lazure, Pascal.
The accuracy of temperature measurements from drifters is first examined for 16 drifters (manufactured either by Metocean Data Systems or by Pacific Gyre) deployed with two temperature sensors in the tropical or North Atlantic Ocean. One of these sensors is the SST thermistor commonly used on Surface Velocity Program (SVP) drifters since the late 1980s; whereas the other sensor is a platinum temperature probe associated with a Seabird conductivity cell. The authors find (for 19 separate deployments) an average positive offset of the SST thermistor measurements in 17 out of 19 cases, exceeding 0.1 degrees C in five instances. Among the five drifters that were at sea for a year or more, two present a large trend in this offset (0.10 degrees and -0.10 degrees...
Tipo: Text Palavras-chave: Temperature; Sea surface temperature; Instrumentation; Sensors.
Ano: 2010 URL: https://archimer.ifremer.fr/doc/00012/12327/9112.pdf
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Fluctuations à long terme du thon rouge: validité, origines et conséquences ArchiMer
Ravier, Christelle.
Describe and gain understanding on fluctuations in animal population over time and space is a central goal of population ecology. This is also crucial to ensure the sustainable management of exploited resources, particularly those with complex population dynamics such as the bluefin tuna. The goal of this work is to collect bluefin tuna catches from the ancestral Mediterranean and Atlantic trap fisheries to (i) characterise long-term fluctuations in bluefin tuna population migrating in the Mediterranean, (ii) analyse their causes et (iii) assess their implications for fisheries management. The bluefin tuna main biological and ecological characteristics are first detailed. Then, the first part presents the trap fishery, and the process of collect and...
Tipo: Text Palavras-chave: Biological reference point; V.p.a.; Management; Migration; N.a.o.; Temperature; Tunas/environment relationships; Population dynamics; Periodic fluctuations; Long term trend; Time series; East Atlantic; Mediterranean Sea; Trap fishery; Thunnus thynnus; Points biologiques de référence; V.p.a.; Modèle global; Migration; N.a.o.; Température; Relation thon/environnement; Dynamique de population; Fluctuations périodiques; Tendances à long terme; Séries temporelles; Atlantique Est; Méditerranée; Madrague; Thunnus thynnus.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/2003/these-65.pdf
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Organic Carbon Export and Loss Rates in the Red Sea ArchiMer
Kheireddine, Malika; Dall'Olmo, Giorgio; Ouhssain, Mustapha; Krokos, George; Claustre, Hervé; Schmechtig, Catherine; Poteau, Antoine; Zhan, Peng; Hoteit, Ibrahim; Jones, Burton H..
The export and fate of organic carbon in the mesopelagic zone are still poorly understood and quantified due to lack of observations. We exploited data from a biogeochemical‐Argo float that was deployed in the Red Sea to study how a warm and hypoxic environment can affect the fate of the organic carbon in the ocean's interior. We observed that only 10% of the particulate organic carbon (POC) exported survived at depth due to remineralization processes in the upper mesopelagic zone. We also found that POC exported was rapidly degraded in a first stage and slowly in a second one, which may be dependent on the palatability of the organic matter. We observed that apparent oxygen utilization (AOU)‐based loss rates (a proxy of the remineralization of total...
Tipo: Text Palavras-chave: Carbon export; Carbon loss rates; Mesopelagic zone; Temperature; Oxygen; Tropical ecosystem.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00655/76730/77877.pdf
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Natural factors to consider when using acetylcholinesterase activity as neurotoxicity biomarker in Young-Of-Year striped bass (Morone saxatilis) ArchiMer
Durieux, Eric; Farver, Thomas B.; Fitzgerald, Patrick S.; Eder, Kai J.; Ostrach, David J..
Acetylcholinesterase (AChE) activity is one of the most common biomarkers of neurotoxicity used in aquatic organisms. However, compared to its extensive use as biomarker, the effects of natural factors onAChE activity remain unclear especially in estuarine fishes. The aim of this study was to evaluate the effects of natural factors on AChE activity of striped bass (Morone saxatilis) juveniles. Brain AChE activity was measured in YOY (Young-Of-Year) individuals collected monthly from August 2007 to January 2008 at 12 different sites in the San Francisco Estuary system. The spatio-temporal variability of AChE was analyzed relative to water temperature and salinity as well as fish size. AChE activity was highly positively correlated with water temperature and...
Tipo: Text Palavras-chave: Fish; Biomarker; Acetylcholinesterase; Brain; Temperature; Salinity; Size.
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00008/11939/8642.pdf
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Global expressions for seasonal temperatures of the sea surface and ambient air - The influence of tidal currents and water depth ArchiMer
Prandle, D.
A 'single point' coupled ocean-atmosphere model is formulated to study seasonal temperature cycles with particular application to shelf seas. The simplified atmospheric module is consistent with the physical processes described by Gill [4] while the vertical exchange of heat in the ocean module is determined via a turbulence closure model. The various empirical coefficients in the atmospheric module were determined by fitting the model output to North Atlantic observational data over the latitude range 0 degrees to 65 degrees N. The model is then applied to the shallow, strongly tidal North Sea. The general validity of the model is demonstrated, thereby indicating that the seasonal cycles of the sea surface, T-s, and ambient air, T-a, are generally...
Tipo: Text Palavras-chave: Température; Cycle annuel; Couplage océan-atmosphère; Mer bordière; Mer du Nord; Temperature; Annual cycle; Atmosphere-ocean coupling; Shelf seas; North Sea.
Ano: 1998 URL: http://archimer.ifremer.fr/doc/00325/43665/43205.pdf
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Modeling the impact of hypoxia on the energy budget of Atlantic cod in two populations of the Gulf of Saint-Lawrence, Canada ArchiMer
Lavaud, Romain; Thomas, Yoann; Pecquerie, Laure; Benoit, Hugues P.; Guyondet, Thomas; Flye-sainte-marie, Jonathan; Chabot, Denis.
Like many marine species around the globe, several stocks of Atlantic cod (Gadus morhua) live in increasingly hypoxic waters. In the Gulf of Saint Lawrence (GSL) in Canada, the deep channels traversing the semi-enclosed sea exhibit year-round hypoxia, identified as one of the limiting factor for the recovery of GSL cod in its northern part. While many individuals in the northern GSL are known to venture in deeper, warmer, and more hypoxic waters of the Gulf channels, those in the southern GSL live in a shallower, colder, and more oxygenated environment. In this study, we use the modeling framework of the Dynamic Energy Budget (DEB) theory to disentangle the effects of hypoxia, temperature and food on the life-history traits of these two populations of cod...
Tipo: Text Palavras-chave: Hypoxia; Dynamic energy budget; Atlantic cod; Growth; Temperature; Gulf of Saint-Lawrence.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00448/55966/57472.pdf
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Toxin and Growth Responses of the Neurotoxic Dinoflagellate Vulcanodinium rugosum to Varying Temperature and Salinity ArchiMer
Abadie, Eric; Muguet, Alexia; Berteaux, Tom; Chomerat, Nicolas; Hess, Philipp; Roque D'Orbcastel, Emmanuelle; Masseret, Estelle; Laabir, Mohamed.
Vulcanodinium rugosum, a recently described species, produces pinnatoxins. The IFR-VRU-01 strain, isolated from a French Mediterranean lagoon in 2010 and identified as the causative dinoflagellate contaminating mussels in the Ingril Lagoon (French Mediterranean) with pinnatoxin-G, was grown in an enriched natural seawater medium. We tested the effect of temperature and salinity on growth, pinnatoxin-G production and chlorophyll a levels of this dinoflagellate. These factors were tested in combinations of five temperatures (15, 20, 25, 30 and 35 °C) and five salinities (20, 25, 30, 35 and 40) at an irradiance of 100 µmol photon m−2 s−1. V. rugosum can grow at temperatures and salinities ranging from 20 °C to 30 °C and 20 to 40, respectively. The optimal...
Tipo: Text Palavras-chave: Vulcanodinium rugosum; Mediterranean Ingril Lagoon; Toxin production; Growth conditions; Temperature; Salinity.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00333/44429/44095.pdf
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Flow cytometry to measure impact of temperature and salinity on the survival of Bonamia ostreae, parasite infecting flat oyster Ostrea edulis, in seawater ArchiMer
Arzul, Isabelle; Bond, Celine; Gagnaire, Beatrice; Morga, Benjamin; Chollet, Bruno; Ferrand, Sylvie; Robert, Maeva; Renault, Tristan.
Bonamiosis due to the intrahaemocytic protistan parasite Bonamia ostreae is a European endemic disease affecting the flat oyster, Ostrea edulis. After its first description in June 1979ı in Brittany, the parasite rapidly spread to all French oyster farming areas and in other European countries through transfers of live molluscs. The parasite has been described in different ecosystems from estuaries to open sea and no clear correlations could he demonstrated between the disease development and environmental parameters like temperature or salinity. The infection can he directly transmitted by cohabitation between infected and non infected oysters. Nevertheless, the parasite life cycle, including its survival outside the host, is not completely...
Tipo: Text Palavras-chave: Impact; Salinity; Temperature; Flow cytometry; Bonamia ostreae; Parasite; Ostrea edulis; Oyster.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/acte-3372.pdf
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Evidence for northward expansion of Antarctic Bottom Water mass in the Southern Ocean during the last glacial inception ArchiMer
Govin, Aline; Michel, Elisabeth; Labeyrie, Laurent; Waelbroeck, Claire; Dewilde, Fabien; Jansen, Eystein.
We investigated deep water changes in the Southern Ocean during the last glacial inception, in relationship to surface hydrology and global climatology, to better understand the mechanisms of the establishment of a glacial ocean circulation. Changes in benthic foraminiferal delta(13)C from three high-resolution cores are compared and indicate decoupled intermediate and deep water changes in the Southern Ocean. From the comparison with records from the North Atlantic, South Atlantic, and the Southern Ocean, we show that the early southern deep water delta(13)C drop observed at the MIS 5.5-5.4 transition occurred before any significant reduction of North Atlantic Deep Water ventilation. We propose that this drop is linked to the northward expansion of poorly...
Tipo: Text Palavras-chave: Isotope substage 5E; Ice core; Interglacial period; Climate variability; Deep ocean; Atlantic; Sea; Circulation; Temperature; Hemisphere.
Ano: 2009 URL: https://archimer.ifremer.fr/doc/00208/31952/30375.pdf
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Traitement à haute température des huîtres infectées par l’ostreid herpesvirus 1 (OsHV-1). TEMPO - Rapport 2016 ArchiMer
Pernet, Fabrice.
Le naissain d’huître creuse Crassostrea gigas est touché chaque année depuis 2008 par des mortalités causées par un microvariant de l’ostreid herpesvirus 1 (OsHV-1 μVar). Plusieurs études montrent que ces évènements de mortalité se produisent préférentiellement lorsque la température de l’eau est comprise entre 16°C et 24°C. Par conséquent, une exposition rapide des huîtres infectées par OsHV-1 à des températures supérieures à 24°C pourrait limiter les mortalités causées par le virus. Il est proposé de (1) vérifier l’hypothèse selon laquelle l’exposition à haute température réduit la mortalité des huîtres infectées par OsHV-1, et (2) déterminer si les animaux qui ont survécu suite à l’infection par OsHV-1 et au traitement thermique sont...
Tipo: Text Palavras-chave: Epidémiologie; Huître; OsHV-1; Risque; Survie; Température; Epidemiology; Oysters; OsHV-1; Risk; Survival; Temperature.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00434/54574/55953.pdf
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Modelling the influence of environmental factors on the physiological status of the Pacific oyster Crassostrea gigas in an estuarine embayment; The Baie des Veys (France) ArchiMer
Grangere, Karine; Menesguen, Alain; Lefebvre, Sébastien; Bacher, Cedric; Pouvreau, Stephane.
It is well known that temporal changes in bivalve body mass are strongly correlated with temporal variations in water temperature and food supply. In order to study the influence of the year-to-year variability of environmental factors on oyster growth, we coupled a biogeochemical sub-model, which simulates trophic resources of oysters (i.e. phytoplankton biomass via chlorophyll a), and an ecophysiological sub-model, which simulates growth and reproduction (i.e. gametogenesis and spawning), using mechanistic bases. The biogeochemical sub-model successfully simulated phytoplankton dynamics using river nutrient inputs and meteorological factors as forcing functions. Adequate simulation of oyster growth dynamics requires a relevant food quantifier compatible...
Tipo: Text Palavras-chave: Baie des Veys; Normandy; France; Physiological Status; Phytoplankton Carbon Concentration; Food Supply; Temperature; Dynamic Energy Budget model; Biogeochemical Model.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6809.pdf
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Influence of ambient oxygenation and temperature on metabolic scope and scope for heart rate in the common sole Solea solea ArchiMer
Lefrancois, Christelle; Claireaux, Guy.
The objective of this study was to quantify the constraints exerted by temperature and oxygenation on both metabolic scope and scope for heart rate of the common sole Solea solea. We exposed sole to a large range of temperature and oxygenation conditions and a modelling procedure was implemented to describe metabolic and cardiac responses. Standard metabolic rate (SMR) rose exponentially from 4 to 24degreesC, whereas active metabolic rate (AMR) increased from 55.4 to 159.2 mgO(2) kg(-1) h(-1) between 4 and 19.7degreesC, and then dropped to 129.9 mgO(2) kg(-1) h(-1) at 24degreesC. In parallel, optimal temperature for maximising metabolic scope, defined as the difference between AMR and SMR, was estimated to 18.8degreesC. Active heart rates increased...
Tipo: Text Palavras-chave: Metabolic scope; Heart rate; Biological performance; Temperature; Oxygen; Common sole.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/00000/10690/7594.pdf
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Full-depth temperature trends in the northeastern Atlantic through the early 21st century ArchiMer
Desbruyeres, D.g.; Mcdonagh, E. L.; King, B. A.; Garry, F. K.; Blaker, A. T.; Moat, B. I.; Mercier, Herle.
The vertical structure of temperature trends in the northeastern Atlantic (NEA) is investigated using a blend of Argo and hydrography data. The representativeness of sparse hydrography sampling in the basin mean is assessed using a numerical model. Between 2003 and 2013, the NEA underwent a strong surface cooling (0–450 m) and a significant warming at intermediate and deep levels (1000 m to 3000 m) that followed a strong cooling trend observed between 1988 and 2003. During 2003–2013, gyre-specific changes are found in the upper 1000 m (warming and cooling of the subtropical and subpolar gyres, respectively), while the intermediate and deep warming primarily occurred in the subpolar gyre, with important contributions from isopycnal heave and water mass...
Tipo: Text Palavras-chave: North Atlantic; Temperature; Observations; Hiatus.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00236/34677/33026.pdf
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THE AEROCLIPPER A New Device to Explore Convective Systems and Cyclones ArchiMer
Duvel, J. P.; Basdevant, C.; Bellenger, H.; Reverdin, Gilles; Vargas, A.; Vialard, Jerome.
Aeroclipper balloons, designed for taking measurements at the air-sea interface, can withstand extreme conditions encountered when they are drawn into tropical cyclones and then follow the eye trajectory.
Tipo: Text Palavras-chave: Atmospheric research; Boundary layer; Surface fluxes; Arabian sea; Parameterization; Balloons; Ocean; Temperature; Enhancement; Evaporation.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00185/29635/27989.pdf
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Assessing the long-term effect of exposure to dispersant-treated oil on fish health using hypoxia tolerance and temperature susceptibility as ecologically relevant biomarkers ArchiMer
Mauduit, Florian; Farrell, Anthony P.; Domenici, Paolo; Lacroix, Camille; Le Floch, Stephane; Lemaire, Pphilippe; Nicolas-kopec, Annabelle; Whittington, Mark; Le Bayon, Nicolas; Zambonino-infante, Jose-luis; Claireaux, Guy.
Consequences of exposure to polyaromatic hydrocarbons (PAH), toxic components of crude oil, on fish has been widely documented due to their ecological and economical importance. However, although forming a valuable and consistent body of knowledge, use of these data in spill response is limited. Objective of the present study was thus to facilitate the translation of published data into information of operational value. For this, we investigated the dose‐response relationship between dispersant‐treated oil exposure and ecologically‐relevant consequences by combining laboratory and field experiments. Effects were examined over almost a year using juveniles of the slow growing, commercially important European sea bass (Dicentrarchus labrax). Moreover, a...
Tipo: Text Palavras-chave: Oil spills; Polycyclic aromatic hydrocarbons (PAHs); Fish indices; Hypoxia; Temperature.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00455/56679/58438.pdf
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The role of hydrographic parameters, measured from a ship of opportunity, in bloom formation of Karenia mikimotoi in the English Channel ArchiMer
Hartman, S.e.; Hartman, M. C.; Hydes, D.j.; Smythe-wright, D.; Gohin, Francis; Lazure, Pascal.
Unusually high chlorophyll values (~ 14 mg chl m− 3 at 5 m depth), recorded on a ship of opportunity (SOO) in July 2010, indicated the occurrence of a potential Harmful Algal Bloom (HAB) in the Western approaches of the English Channel. This bloom, located at 49.7°N, 3.2°W was observed via complementary datasets. These included data from samples collected for microscopic phytoplankton identification, information from satellite maps to follow geographical bloom development and in situ data to identify hydrographic factors related to bloom initiation. The relationships between chlorophyll-fluorescence, temperature, salinity and wind speed were examined. The intense summer bloom predominantly consisted of the dinoflagellate Karenia mikimotoi and followed an...
Tipo: Text Palavras-chave: Karenia mikimotoi; Harmful algae; Wind speed; Temperature; Low salinity water; French Atlantic rivers; English Channel; Ferry-box.
Ano: 2014 URL: https://archimer.ifremer.fr/doc/00199/31033/29437.pdf
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Storage of Pacific oysters Crassostrea gigas in recirculating tank: ammonia excretion and potential nitrification rates ArchiMer
Buzin, Florence; Dupuy, Beatrice; Lefebvre, Sebastien; Barille, Laurent; Haure, Joel.
In response to the closure of shellfish production sites due to increasing occurrence of toxic algal blooms, land-based recirculating aquaculture systems (RAS) could be used by producers to store a proportion of their stock temporarily. An RAS prototype was tested in this study to store Pacific oyster Crassostrea gigas over a range of temperatures. In such systems, the water temperature is a variable that could influence the bivalve excretion rate of ammonia, the concentration of which may become critical for the water quality. In this study, we first estimated the total ammonia nitrogen (TAN, N-NH4+ + N-NH3) excretion of the Pacific oyster and then investigated whether the bacterial population associated with the oysters could act as a natural biofilter...
Tipo: Text Palavras-chave: Crassostrea gigas; Ammonia excretion; Nitrification rate; Recirculating system; Temperature.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00248/35889/34409.pdf
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Ocean warming combined with lower omega-3 nutritional availability impairs the cardio-respiratory function of a marine fish ArchiMer
Vagner, Marie; Pante, Eric; Viricel, Amelia; Lacoue-labarthe, Thomas; Zambonino-infante, Jose-luis; Quazuguel, Patrick; Dubillot, Emmanuel; Huet, Valerie; Le Delliou, Herve; Lefrançois, Christel; Imbert-auvray, Nathalie.
Highly unsaturated fatty acids of the omega-3 series (HUFA) are major constituents of cell membranes, yet poorly synthesised de novo by consumers. Their production, mainly supported by aquatic microalgae, has been decreasing with global change. Understanding the consequences of such reductions is essential for ectotherm consumers, since temperature tightly regulates the HUFA content in cell membranes, maintaining their functionality. Integrating individual, tissue and molecular approaches, we examined the consequences of the combined effects of temperature and HUFA depletion on the key cardio-respiratory functions of the golden grey mullet, an ectotherm grazer of high ecological importance. For four months, fish were exposed to two contrasting HUFA diets...
Tipo: Text Palavras-chave: Omega-3 highly unsaturated fatty acids; Temperature; Cardiac performance; Swimming performance; Chelon auratus; RNAseq.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00476/58744/63565.pdf
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Effect of exposure to petroleum hydrocarbons upon cardio-respiratory function in the common sole (Solea solea) ArchiMer
Claireaux, Guy; Davoodi, Fariba.
The long term consequences of oil exposure upon marine populations are still poorly evaluated. One particular missing piece of information relates to the link between oil exposure, individuals' ability to face environmental contingencies and populations' production and dynamics. In that context, the present paper investigates the impact of oil exposure upon fish cardio-respiratory performance, this performance being viewed as a key determinant of individual fitness. Experimental conditions replicated the contamination conditions observed during the weeks that immediately followed the Erika oil spill (west coast of France; December 1999). Sole (Solea solea), were exposed to number-2 oil for 5 days and were then challenged with an acute rise in temperature...
Tipo: Text Palavras-chave: Petroleum hydrocarbons; Temperature; Oxygen consumption; Cardiac performance; Environmental adaptation; Solea solea.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00006/11765/9272.pdf
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Caracteristiques topographiques et thermiques d'un site de ponte majeur de la tortue verte Chelonia mydas dans l'Ocean Indien sud-ouest: Europa ArchiMer
Le Gall, Jean-yves; Taquet, Marc; Cluet, Denis; Biais, Gerard.
The beach of the meteorological station of Europa Island (Indian Ocean S.W.) is a major nesting site for the green turtle. Altimetric distribution of nests on the beach is such than 95 % of nests are laid in the band located between 1.25 and 3 m above the mean level of upper tides. Nest density is a function of adult females number and varies from 0.175 to 0.043 nest/m2 for the two analyzed nesting seasons. Ground temperatures at 60 cm and 100 cm depth range from 22 (winter) to, 30°C (summer). Interannual variability of ground temperature at same depth (incubation depth) is 1.5° C from extreme hot to cold years. These intra and interannual variations are supposed to have an effect upon the sex-ratio of hatchlings
Tipo: Text Palavras-chave: Tortue verte; Chelonia mydas; Ponte; Distribution; Température; Incubation; Green turtle; Chelonia mydas; Nest; Distribution; Temperature; Incubation.
Ano: 1988 URL: http://archimer.ifremer.fr/doc/00113/22407/20104.pdf
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