|
|
|
| Registros recuperados: 32 | |
|
| |
|
|
| Huret, Martin; Petitgas, Pierre; Struski, Caroline; Leger, Fabien; Sourisseau, Marc; Lazure, Pascal. |
| Overexploitation and climate change are increasingly causing unanticipated changes in marine ecosystems, such as higher variability in fish recruitment and shifts in species distribution, pressing for developing fisheries oceanography. In the meantime, operational oceanography rapidly progresses and its products become easy to access to a large community, among them fisheries scientists. Multiyear oceanographic reanalyses (hindcasts) were identified has a priority product by the ICES WG on Operational Oceanographic Products for Fisheries and Environment (WGOOFE). We performed a 37 years hindcast (1972-2008) run with a coupled physical-biogeochemical model (ECO-MARS3D) over the Bay of Biscay, using realistic meteorological and run-off forcing. We first... |
| Tipo: Text |
|
| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00023/13432/10442.pdf |
| |
|
|
| Davidson, Keith; Anderson, Donald M.; Mateus, Marcos; Reguera, Beatriz; Silke, Joe; Sourisseau, Marc; Maguire, Julie. |
| The “Applied Simulations and Integrated Modelling for the Understanding of Harmful Algal Blooms” (Asimuth) project sought to develop a harmful algal bloom (HAB) alert system for Atlantic Europe. This was approached by combining, at a national or regional level, regulatory monitoring phytoplankton and biotoxin data with satellite remote sensing and other information on current marine conditions, coupled with regional scale models that included a representation of HAB transport. Synthesis of these products was achieved by expert interpretation within HAB risk alert bulletins that were prepared on a regular basis (typically weekly) for use by the aquaculture industry. In this preface to the Asimuth Special Issue we outline the main HAB species of concern in... |
| Tipo: Text |
|
| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00333/44435/45789.pdf |
| |
|
|
| Landeira, Jose Maria; Ferron, Bruno; Lunven, Michel; Morin, Pascal; Marie, Louis; Sourisseau, Marc. |
| Phytoplankton blooms are usually dominated by chain-forming diatom species that can alter food pathways from primary producers to predators by reducing the interactions between intermediate trophic levels. The food-web modifications are determined by the length of the chains; however, the estimation is biased because traditional sampling strategies damage the chains and, therefore, change the phytoplankton size structure. Sedimentological studies around oceanic fronts have shown high concentrations of giant diatom mats (>1 cm in length), suggesting that the size of diatom chains is underestimated in the pelagic realm. Here, we investigate the variability in size and abundance of phytoplankton chains at the Ushant tidal front (NW France) using the Video... |
| Tipo: Text |
|
| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00186/29730/28148.pdf |
| |
|
|
| Huret, Martin; Sourisseau, Marc; Petitgas, Pierre; Struski, Caroline; Leger, Fabien; Lazure, Pascal. |
| Multiple year oceanographic simulations (hindcast) are identified as a priority oceanography product for fisheries and environment studies since they provide a unique continuous long-term dataset allowing integrated assessment of the ocean state and evolution. We performed a 37 year (1972–2008) hindcast run with a coupled physical–biogeochemical model in the Bay of Biscay. The coupled model and the hindcast configuration are described. A model skill assessment is performed with a large set of in-situ data. Average seasonal currents show major circulation patterns over the shelf. Among tracers, temperature and salinity have the best agreement, ahead of nitrates and silicates, chlorophyll, and finally phosphates and ammonium. For chlorophyll, improved... |
| Tipo: Text |
Palavras-chave: Physical-biogeochemical model; Hindcast; Skill assessment; Environmental indices; Seasonal pattern; Interannual variability; Fisheries oceanography; Bay of Biscay. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00114/22538/20237.pdf |
| |
|
| |
|
|
| Ramond, Pierre; Sourisseau, Marc; Simon, Nathalie; Romac, Sarah; Schmitt, Sophie; Rigaut-jalabert, Fabienne; Henry, Nicolas; De Vargas, Colomban; Siano, Raffaele. |
| The study of protistan functional diversity is crucial to understand the dynamics of oceanic ecological processes. We combined the metabarcoding data of various coastal ecosystems and a newly developed trait‐based approach to study the link between taxonomic and functional diversity across marine protistan communities of different size‐classes. Environmental DNA was extracted and the V4 18S rDNA genomic region was amplified and sequenced. In parallel, we tried to annotate the Operational Taxonomic Units (OTUs) from our metabarcoding dataset to 30 biological traits using published and accessible information on protists. We then developed a method to study trait correlations across protists (i.e. trade‐offs) in order to build the best functional groups.... |
| Tipo: Text |
|
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00478/58964/61554.pdf |
| |
|
|
| Lazure, Pascal; Huret, Martin; Gohin, Francis; Sourisseau, Marc; Saulquin, Bertrand; Lecornu, Fabrice; De Roeck, Yann-herve; Legrand, Jacques; Thomin, Pascale; Aoustin, Yannick; Jegou, P.; Baraer, F.; Le Stum, M.; Louazel, Stephanie; Equipe projet PREVIMER. |
| Sommaire * Météo, états de mer et débits des fleuves.....................2 * Caractéristiques des masses d’eau côtières..............6 * Production biologique............11 * Les faits marquants................12 * Rappel des objectifs du bulletin PREVIMER..................13 * Les moyens d’observations et de prévisions de l’état des mers côtières...........................13 * Glossaire..................................15 |
| Tipo: Text |
|
| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/00242/35360/33860.pdf |
| |
|
| |
|
|
| Cadier, Mathilde; Sourisseau, Marc; Gorgues, Thomas; Edwards, Christopher A.; Memery, Laurent. |
| Tidal front ecosystems are especially dynamic environments usually characterized by high phytoplankton biomass and high primary production. However, the description of functional microbial diversity occurring in these regions remains only partially documented. In this article, we use a numerical model, simulating a large number of phytoplankton phenotypes to explore the three-dimensional spatial patterns of phytoplankton abundance and diversity in the Iroise Sea (western Brittany). Our results suggest that, in boreal summer, a seasonally marked tidal front shapes the phytoplankton species richness. A diversity maximum is found in the surface mixed layer located slightly west of the tidal front (i.e., not strictly co-localized with high biomass... |
| Tipo: Text |
Palavras-chave: Plankton functional traits; Biodiversity; Biogeography; Local adaptation; Dynamical transport; Tidal front. |
| Ano: 2017 |
URL: http://archimer.ifremer.fr/doc/00367/47861/48101.pdf |
| |
|
|
| Ramond, Pierre; Siano, Raffaele; Schmitt, Sophie; De Vargas, Colomban; Marié, Louis; Memery, Laurent; Sourisseau, Marc. |
| Oceanic physics at fine scale; e.g. eddies, fronts, filaments; are notoriously difficult to sample. However, an increasing number of theoretical approaches hypothesize that these processes affect phytoplankton diversity which have cascading effects on regional ecosystems. In 2015, we targeted the Iroise Sea (France) and evidenced the setting up of the Ushant tidal front from the beginning of spring to late summer. Seawater samples were taken during three sampling cruises and DNA-barcoding allowed us to investigate patterns of eukaryotic phytoplankton diversity across this front. First focusing on patterns of taxonomic richness, we evidenced that the front harbored a hotspot of eukaryotic phytoplankton diversity sustained throughout summer. We then detail... |
| Tipo: Text |
|
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00677/78933/81307.pdf |
| |
|
| |
|
| |
|
|
| Metegnier, Gabriel; Paulino, Sauvann; Ramond, Pierre; Siano, Raffaele; Sourisseau, Marc; Destombe, Christophe; Le Gac, Mickael. |
| Harmful algal blooms are caused by specific members of microbial communities. Understanding the dynamics of these events requires comparing the strategies developed by the problematic species to cope with environmental fluctuations to the ones developed by the other members of the community. During three consecutive years, the meta-transcriptome of micro-eukaryote communities was sequenced during blooms of the toxic dinoflagellate Alexandrium minutum. The dataset was analyzed to investigate species specific gene expression dynamics. Major shifts in gene expression were explained by the succession of different species within the community. Although expression patterns were strongly correlated with fluctuation of the abiotic environment, and more... |
| Tipo: Text |
|
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00622/73390/72602.pdf |
| |
|
| |
|
|
| Cadier, Mathilde; Gorgues, Thomas; Sourisseau, Marc; Edwards, Christopher A.; Aumont, Olivier; Marie, Louis; Memery, Laurent. |
| Understanding the dynamic interplay between physical, biogeochemical and biological processes represents a key challenge in oceanography, particularly in shelf seas where complex hydrodynamics are likely to drive nutrient distribution and niche partitioning of phytoplankton communities. The Iroise Sea includes a tidal front called the ‘Ushant Front’ that undergoes a pronounced seasonal cycle, with a marked signal during the summer. These characteristics as well as relatively good observational sampling make it a region of choice to study processes impacting phytoplankton dynamics. This innovative modeling study employs a phytoplankton-diversity model, coupled to a regional circulation model to explore mechanisms that alter biogeography of phytoplankton in... |
| Tipo: Text |
Palavras-chave: Iroise Sea; Tidal mixing front; Biogeochemical modeling; Phytoplankton; Functional groups; Seasonal cycle. |
| Ano: 2017 |
URL: http://archimer.ifremer.fr/doc/00352/46367/45986.pdf |
| |
|
| |
|
|
| Vandromme, Pierre; Nogueira, Enrique; Huret, Martin; Lopez-urrutia, Angel; Gonzalez-nuevo Gonzalez, G.; Sourisseau, Marc; Petitgas, Pierre. |
| Linking lower and higher trophic levels requires special focus on the essential role played by mid-trophic levels, i.e., the zooplankton. One of the most relevant pieces of information regarding zooplankton in terms of flux of energy lies in its size structure. In this study, an extensive data set of size measurements is presented, covering parts of the western European continental shelf and slope, from the Galician coast to the Ushant front, during the springs from 2005 to 2012. Zooplankton size spectra were estimated using measurements carried out in situ with the Laser Optical Plankton Counter (LOPC) and with an image analysis of WP2 net samples (200 μm mesh size) performed following the ZooScan methodology. The LOPC counts and sizes particles within... |
| Tipo: Text |
|
| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00221/33246/31744.pdf |
| |
|
|
| Pinazo, Christel; Ross, Oliver; Diaz, F.; Doglioli, A.m.; D'Ortenzio, F.; Estournel, C.; Forget, P.; Garnier, Valerie; Gutknecht, E.; Kersale, M.; Kessouri, F.; Lathuilière, C.; Marie, Louis; Marmain, J.; Marsaleix, P.; Perruche, C.; Petrenko, A.; Reffray, G.; Sourisseau, Marc; Taillandier, V.; Taupier-letage, I.; Testor, P.; Thouvenin, Benedicte; Ulses, C.; Eldin, G.. |
| Tipo: Text |
|
| Ano: 2015 |
URL: http://archimer.ifremer.fr/doc/00292/40336/41772.pdf |
| |
| Registros recuperados: 32 | |
|
|
|
