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SSU rDNA Divergence in Planktonic Foraminifera: Molecular Taxonomy and Biogeographic Implications ArchiMer
Andre, Aurore; Quillevere, Frederic; Morard, Raphael; Ujiie, Yurika; Escarguel, Gilles; De Vargas, Colomban; De Garidel-thoron, Thibault; Douady, Christophe J..
The use of planktonic foraminifera in paleoceanography requires taxonomic consistency and precise assessment of the species biogeography. Yet, ribosomal small subunit (SSUr) DNA analyses have revealed that most of the modern morphospecies of planktonic foraminifera are composed of a complex of several distinct genetic types that may correspond to cryptic or pseudo-cryptic species. These genetic types are usually delimitated using partial sequences located at the 3'end of the SSUrDNA, but typically based on empirical delimitation. Here, we first use patristic genetic distances calculated within and among genetic types of the most common morpho-species to show that intra-type and inter-type genetic distances within morpho-species may significantly overlap,...
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Ano: 2014 URL: https://archimer.ifremer.fr/doc/00290/40107/38859.pdf
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Nomenclature for the Nameless: A Proposal for an Integrative Molecular Taxonomy of Cryptic Diversity Exemplified by Planktonic Foraminifera ArchiMer
Morard, Raphael; Escarguel, Gilles; Weiner, Agnes K. M.; Andre, Aurore; Douady, Christophe J.; Wade, Christopher M.; Darling, Kate F.; Ujiie, Yurika; Seears, Heidi A.; Quillevere, Frederic; De Garidel-thoron, Thibault; De Vargas, Colomban; Kucera, Michal.
Investigations of biodiversity, biogeography, and ecological processes rely on the identification of "species" as biologically significant, natural units of evolution. In this context, morphotaxonomy only provides an adequate level of resolution if reproductive isolation matches morphological divergence. In many groups of organisms, morphologically defined species often disguise considerable genetic diversity, which may be indicative of the existence of cryptic species. The diversity hidden by morphological species can be disentangled through genetic surveys, which also provide access to data on the ecological distribution of genetically circumscribed units. These units can be identified by unique DNA sequence motifs and allow studies of evolutionary and...
Tipo: Text Palavras-chave: Cryptic species; Genetic diversity; Planktonic foraminifera; Molecular nomenclature; MOTUs.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00383/49408/49900.pdf
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