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Rapport de campagne de nourriceries côtières : Campagne Nurse 2017 ArchiMer
Brind'Amour, Anik; Le Bris, Hervé; Delaunay, Damien; Berthele, Olivier; Baudrier, Jerome.
Dans le cadre de la mise en œuvre du programme de surveillance de la directive cadre stratégie pour le milieu marin (DCSMM), le suivi des poissons et céphalopodes démersaux des milieux meubles côtiers a été jugé prioritaire. Pour ce faire, une série de campagnes halieutiques récurrentes a été déployée dans les nourriceries côtières, constituant des habitats essentiels pour de nombreuses espèces marines. La caractérisation de l’état écologique des peuplements et l’étude de la fonctionnalité des habitats de nourriceries s’avèrent nécessaires au calcul des indicateurs du Bon Etat Ecologique requis par la DCSMM et primordiales pour la mise en place de mesures de gestion écosystémique garantissant des usages durables. La campagne Nurse conduite dans le golfe de...
Tipo: Text Palavras-chave: Fonctionnement des nourriceries côtières; Suivi; Dynamique temporelle; Communautés bentho-démersales; DCSMM.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00482/59384/62147.pdf
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Grands invertébrés et poissons observés par les campagnes scientifiques. Atlas de distribution. Bilan 2008 ArchiMer
Trenkel, Verena; Berthele, Olivier; Lorance, Pascal; Bertrand, Jacques; Brind'Amour, Anik; Cochard, Marie-laure; Coppin, Franck; Leaute, Jean-pierre; Mahe, Jean-claude; Morin, Jocelyne; Rochet, Marie-joelle; Salaun, Michele; Souplet, Arnauld; Verin, Yves.
Depuis une vingtaine d'années, l'Ifremer organise des campagnes de pêche scientifique en mer du Nord, Manche, Atlantique et Méditerranée concernant les ressources pélagiques, démersales et benthiques. L'objectif prioritaire est de produire des indices d'abondance des principales espèces commerciales. Elles recueillent également des données sur les espèces capturées non commerciales. Les campagnes sont réalisées selon des plans d'échantillonnage standardisés. L'engin de pêche et son gréement, la position des stations, le tri des captures, les prélèvements biologiques suivent des protocoles fixés. Chaque zone étudiée est découpée en fonction de la profondeur, de la latitude ou d'autres critères. L'échantillonnage prévoit un nombre de traits de chalut...
Tipo: Text Palavras-chave: Populations; Halieutique; Bulletin; Méditerranée; Golfe de Gascogne; Manche; Mer du Nord; France; Pêche; Campagnes à la mer; Atlas; Survey; Mediterranean Sea; Bay of Biscay; English Channel; North Sea; France; Populations; Fishery science; Bulletin; Atlas.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/rapport-6976.pdf
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Integrating spatial indicators in the surveillance of exploited marine ecosystems ArchiMer
Rufino, Marta; Bez, Nicolas; Brind'Amour, Anik.
Spatial indicators are used to quantify the state of species and ecosystem status, that is the impacts of climate and anthropogenic changes, as well as to comprehend species ecology. These metrics are thus, determinant to the stakeholder’s decisions on the conservation measures to be implemented. A detailed review of the literature (55 papers) showed that 18 spatial indicators were commonly used in marine ecology. Those indicators were than characterized and studied in detail, based on its application to empirical data (a time series of 35 marine species spatial distributions, sampled either with a random stratified survey or a regular transects surveys). The results suggest that the indicators can be grouped into three classes, that summarize the way the...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00469/58087/60490.pdf
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We can reduce the impact of scientific trawling on marine ecosystems ArchiMer
Trenkel, Verena; Vaz, Sandrine; Albouy, Camille; Brind'Amour, Anik; Duhamel, Erwan; Laffargue, Pascal; Romagnan, Jean-baptiste; Simon, Julien; Lorance, Pascal.
The negative impacts that scientific monitoring may have on marine ecosystems has been a neglected topic, mainly on the basis that its magnitude is minor compared to commercial fisheries, even though this raises ethical and, in certain cases, conservation issues. We argue that ethical principles should lead us to reconsider marine wildlife resource monitoring such as the fish and shellfish trawl surveys providing the science-based evidence needed for fisheries management and assessment of how environmental change impacts marine shelf communities worldwide. Recent scientific and technological progress has provided methods and tools which might now be harnessed to reduce the impact of marine monitoring. We review these alternative methods, consider...
Tipo: Text Palavras-chave: Monitoring ethics; Marine surveying; Impacts of bottom trawling; Genetic methods; Ecosystem-based management.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00470/58161/60665.pdf
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Large-scale spatio-temporal monitoring highlights hotspots of demersal fish diversity in the Mediterranean Sea ArchiMer
Granger, Victoria; Fromentin, Jean-marc; Bez, Nicolas; Relini, Giulio; Meynard, Christine N.; Gaertner, Jean-claude; Maiorano, Porzia; Garcia Ruiz, Cristina; Follesa, Cristina; Gristina, Michele; Peristeraki, Panagiota; Brind'Amour, Anik; Carbonara, Pierluigi; Charilaou, Charis; Esteban, Antonio; Jadaud, Angelique; Joksimovic, Aleksandar; Kallianiotis, Argyris; Kolitari, Jerina; Manfredi, Chiara; Massuti, Enric; Mifsud, Roberta; Quetglas, Antoni; Refes, Wahid; Sbrana, Mario; Vrgoc, Nedo; Spedicato, Maria Teresa; Merigot, Bastien.
Increasing human pressures and global environmental change may severely affect the diversity of species assemblages and associated ecosystem services. Despite the recent interest in phylogenetic and functional diversity, our knowledge on large spatio-temporal patterns of demersal fish diversity sampled by trawling remains still incomplete, notably in the Mediterranean Sea, one of the most threatened marine regions of the world. We investigated large spatio-temporal diversity patterns by analysing a dataset of 19,886 hauls from 10 to 800 m depth performed annually during the last two decades by standardized scientific bottom trawl field surveys across the Mediterranean Sea, within the MEDITS program. A multi-component (eight diversity indices) and...
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Ano: 2015 URL: https://archimer.ifremer.fr/doc/00216/32743/31322.pdf
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Let's go beyond taxonomy in diet description: testing a trait-based approach to prey-predator relationships ArchiMer
Spitz, Jerome; Ridoux, Vincent; Brind'Amour, Anik.
1. Understanding ‘Why a prey is a prey for a given predator?’ can be facilitated through trait-based approaches that identify linkages between prey and predator morphological and ecological characteristics and highlight key functions involved in prey selection. 2. Enhanced understanding of the functional relationships between predators and their prey is now essential to go beyond the traditional taxonomic framework of dietary studies and to improve our knowledge of ecosystem functioning for wildlife conservation and management. 3. We test the relevance of a three-matrix approach in foraging ecology among a marine mammal community in the northeast Atlantic to identify the key functional traits shaping prey selection processes regardless of the taxonomy...
Tipo: Text Palavras-chave: Foraging strategy; Fourth-corner method; Functional ecology; Marine mammals; Prey selection; RLQ analysis.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00189/30047/29495.pdf
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Variabilité spatiale de la signature multi-élémentaire des otolithes de G0 de Solea solea et Pleuronectes platessa au sein d’un habitat côtier : exemple de la baie de Seine ArchiMer
Durieux, Eric; Mahe, Kelig; Labonne, Maylis; Morin, Jocelyne; Brind'Amour, Anik.
Les zones côtières telles que les baies et les estuaires constituent des nourriceries pour les juvéniles de nombreuses espèces de poissons marins et en particulier les poissons plats. In fine, la fonction de nourricerie d’un habitat repose sur sa capacité à produire des individus qui vont contribuer à la population adulte. La composition élémentaire des otolithes de poissons est devenue un outil important pour étudier la connectivité entre les habitats des juvéniles et des adultes. Cette approche majeure en écologie halieutique repose sur l’identification de signatures multi-élémentaires caractérisant les nourriceries. Il est donc important de considérer les processus spatiaux à plus petite échelle de manière à identifier localement les habitats de...
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Ano: 2014 URL: http://archimer.ifremer.fr/doc/00220/33153/31641.pdf
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Assessment of impacts from human activities on ecosystem components in the Bay of Biscay in the early 1990s ArchiMer
Lorance, Pascal; Bertrand, Jacques; Brind'Amour, Anik; Rochet, Marie-joelle; Trenkel, Verena.
The ecosystem-based approach to fisheries management and, more specifically, the European Marine Strategy Framework Directive require the assessment of the state and dynamics of an ecosystem in order to determine suitable management strategies. This paper takes an analytical approach to assess the state of the Bay of Biscay ecosystem in the early 1990s, chosen as a period of reference because key monitoring data series have been collected since then. To assess the state of the ecosystem, the pressures exerted by six broad categories of human activities were examined. A literature review of the ecosystem components was made and a component tree was tailored according to data availability. Data rich components were subdivided into subcomponents for their...
Tipo: Text Palavras-chave: Reference state; Ecosystem based management; Human pressure; Inventory; Atlantic Ocean.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00000/11164/7520.pdf
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Flatfish ecology: Advances from the 10th international flatfish symposium ArchiMer
Le Pape, Olivier; Brind'Amour, Anik; Begout, Marie-laure.
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00471/58297/60815.pdf
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Community structure and temperature dynamics within a mussel assemblage on the Southern East Pacific Rise ArchiMer
Sarrazin, Jozee; Walter, Cecile; Sarradin, Pierre-marie; Brind'Amour, Anik; Desbruyeres, Daniel; Briand, Patrick; Fabri, Marie-claire; Van Gaever, S; Vanreusel, A; Bachraty, Charleyne; Thiebaut, E.
The composition, biomass and diversity of the fauna in a Bathymodiolus thermophilus mussel assemblage colonizing diffuse flow areas on the SEPR is described and compared with biological characteristics of other hydrothermal assemblages. The spatio-temporal dynamics of temperatures over fine scales within the mussel habitat are characterized using newly-developed statistical approaches. Temperature data obtained from two adjacent habitats (a cirriped assemblage and a bare substratum) are compared. The results of the temperature data show that the mean temperature and the temperature variations were significantly higher in the mussel assemblage (mean temperature: 4.12 +/- 1.85 degrees C) in comparison with 2.40 +/- 0.14 degrees C in the cirriped assemblage...
Tipo: Text Palavras-chave: East Pacific Rise; Temperature dynamics; Biomass; Diversity; Bathymodiolus thermophilus; Mussel assemblage; Hydrothermal vents.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-3570.pdf
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Grands invertébrés et poissons observés par les campagnes scientifiques. Bilan 2007 ArchiMer
Bertrand, Jacques; Brind'Amour, Anik; Cochard, Marie-laure; Coppin, Franck; Leaute, Jean-pierre; Lorance, Pascal; Mahe, Jean-claude; Morin, Jocelyne; Poulard, Jean-charles; Rochet, Marie-joelle; Schlaich, Ivan; Souplet, Arnauld; Trenkel, Verena; Verin, Yves.
The ecosystems exploited by fishing are complex. The species which are sought after and their distribution rely on numerous processes, in time and space. The understanding of marine ecosystems requires important means and diverse information including those of professional fishing and scientific cruises. At first, scientific fishing cruises aimed to explore marine fauna and discover new halieutic resources. They were in line with the exploration cruises carried out by Prince Albert 1st of Monaco at the end of the XIXth century. However, since the beginning of the 1970s, they have been focusing on the quantification of the resources exploited by fishing. [...] After a series of "Understanding keys" aimed at helping the reader understand the methodology and...
Tipo: Text Palavras-chave: Mediterranean Sea; Bay of Biscay; English Channel; North Sea; France; Communities; Populations; Fishery science; Indicators; Bulletin; Méditerranée; Golfe de Gascogne; Manche; Mer du Nord; France; Pêche; Campagnes à la mer; Communautés; Populations; Halieutique; Indicateurs; Bulletin.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/rapport-6160.pdf
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Functional gains of including non-commercial epibenthic taxa in coastal beam trawl surveys: A note ArchiMer
Brind'Amour, Anik; Rouyer, Armelle; Martin, Jocelyne.
The development of ecosystem-based indicators requires the broadening of a view of the community, from fish species to all the species (macrobenthic and fish) correctly captured by a given sampling gear. Many scientific surveys already have such integrated databases. The present note aims to demonstrate that existing databases, herein from dedicated coastal nursery surveys, are actually underexploited. Such databases contain information on non-commercial taxa, which could greatly improve our knowledge on the organisation and functioning of coastal ecosystems. Using two datasets, a "complete" dataset composed of commercial and not-commercial epibenthic trawled species (fish and invertebrate) and a "subset" dataset characterized by commercial and routinely...
Tipo: Text Palavras-chave: Nursery grounds; Functional diversity; Fish community; Coastal surveys; Beam trawl; Bay of Biscay.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6507.pdf
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Spatial analysis of the trophic interactions between two juvenile fish species and their preys along a coastal-estuarine gradient ArchiMer
Kopp, Dorothee; Le Bris, Herve; Grimaud, Lucille; Nerot, Caroline; Brind'Amour, Anik.
Coastal and estuarine systems provide nursery grounds for many marine fish species. Their productivity has been correlated with terrigeneous inputs entering the coastal-estuarine benthic food web, thereby favouring the establishment of fish juveniles. Studies in these ecosystems often describe the nursery as a single large habitat without verifying nor considering the presence of contiguous habitats. Our study aimed at identifying different habitats based on macrozoobenthic communities and morpho-sedimentary characteristics and assessing the trophic interactions between fish juveniles and their benthic preys within these habitats. It included 43 sampling sites covering 5 habitats in which we described taxonomically and quantitatively the invertebrates and...
Tipo: Text Palavras-chave: Stable isotopes; Gut content; Food web; Nursery ground; Solea solea; Trisopterus luscus.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00151/26226/24327.pdf
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Evaluation de la composante de l’écosystème « Poissons et céphalopodes » du descripteur 1 « Biodiversité » en France métropolitaine. ArchiMer
Brind'Amour, Anik; Delaunay, Damien.
The Marine Strategy Framework Directive (MSFD), adopted in June 2008, recommends Member States to adopt an ecosystemic approach to manage the marine environment. By this directive, France aims to achieve a good environmental status (GES) described by 11 descriptors, of its marine waters by 2020. Descriptor 1 stipulates that biological diversity is maintained. The quality and occurrence of habitats and the distribution and abundance of species are in line with prevailing physiographic, geographic and climate conditions (European Commission Decision 2017/848/UE). The ecosystem components of fish and cephalopods must be assessed in the four marine subregions (“English Channel – North Sea”, “Celtic seas”, “Bay of Biscay” and “Western Mediterranea”). The...
Tipo: Text Palavras-chave: DCSMM; Descripteur 1; Bon état écologique; Poissons et céphalopodes; Population d’espèces; Indice d’abondance; Traits d’histoire de vie; Indice de sensibilité; Pression de pêche; Zone fonctionnelle halieutique.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00458/57007/58905.pdf
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Application of Moran Eigenvector Maps (MEM) to irregular sampling designs ArchiMer
Brind'Amour, Anik; Mahevas, Stephanie; Legendre, Pierre; Bellanger, Lise.
Moran’s eigenvectors maps (MEM) are attractive mathematical objects as they are fairly simple to calculate and can be used in most studies of spatially-explicit data. There is, however, an aspect of MEM analysis that still requires some investigation: the effect of irregular sampling on their modeling performance. This study investigates empirically the behavior of MEMs under different irregularity schemes. It is focusing on simulated scenarios representing sampling designs frequently encountered in ecology. We advocate that MEMs can be computed and correctly used with data coming from irregularly designed sampling surveys, given some precautions. We suggest that when the sampling sites are equally spaced but do not cover the entire study area, the MEMs...
Tipo: Text Palavras-chave: Autocorrelation; Irregular sampling; Sampling schemes; Spatial analyses; Statistical methods.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00444/55594/57224.pdf
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Seasonality in coastal macrobenthic biomass and its implications for estimating secondary production using empirical models ArchiMer
Saulnie, Erwan; Brind'Amour, Anik; Tableau, Adrien; Rufino, Marta; Dauvin, Jean‐claude; Luczak, Christophe; Le Bris, Hervé.
Macrobenthic secondary production is widely used to assess the trophic capacity, health, and functioning of marine and freshwater ecosystems. Annual production estimates are often calculated using empirical models and based on data collected during a single period of the year. Yet, many ecosystems show seasonal variations. Although ignoring seasonality may lead to biased and inaccurate estimates of annual secondary production, it has never been tested at the community level. Using time series of macrobenthic data collected seasonally at three temperate marine coastal soft‐bottom sites, we assessed seasonal variations in biomass of macrobenthic invertebrates at both population and community levels. We then investigated how these seasonal variations affect...
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00489/60091/63433.pdf
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Morphospecies and taxonomic sufficiency of benthic megafauna in scientific bottom trawl surveys ArchiMer
Brind'Amour, Anik; Laffargue, Pascal; Morin, Jocelyne; Vaz, Sandrine; Foveau, Aurelie; Le Bris, Herve.
Scientific fisheries surveys routinely identify a large diversity of commercial and non-commercial benthic megainvertebrates that could provide useful information for Marine Strategy Framework Directive (MSFD) descriptors. Species is obviously the basic taxonomic level to which most ecological studies and theories refer. Identification at this level of organization is indeed always preferred over any other taxonomic level. Nevertheless, aggregation of species to higher taxonomic levels may be unavoidable sometimes, since errors of identification are known or suspected to occur in many surveys. Using analyses of taxonomic sufficiency (identification of organisms at various taxonomic resolutions) and groups of morphospecies (taxa identified easily by...
Tipo: Text Palavras-chave: Bay of Biscay; English Channel; North Sea; Taxonomic sufficiency; Benthic descriptor; Bottom trawl surveys.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00162/27309/25538.pdf
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Stable isotope ratios in bentho-demersal biota along a depth gradient in the bay of biscay: A multitrophic study ArchiMer
Schaal, Gauthier; Nerot, Caroline; Grall, Jacques; Chouvelon, Tiphaine; Lorrain, Anne; Mortillaro, Jean-michel; Savoye, Nicolas; Brind'Amour, Anik; Paulet, Yves-marie; Le Bris, Herve.
Although stable isotope ratios are increasingly used to investigate the trophic ecology of marine organisms, their spatial variations are still poorly understood in the coastal environment. In this study, we measured the stable isotope composition (δ13C, δ15N) of suspended particulate organic matter (SPOM) (primary producer), a suspension feeder, the great scallop Pecten maximus (primary consumer), megabenthic decapods and benthic fishes (secondary consumers) along a depth gradient (from 5m to 155m depth) across the continental shelf of the Bay of Biscay. Although the three trophic levels exhibited similar δ13C patterns along the gradient, the δ15N patterns varied between SPOM, scallops and carnivores. The δ15N difference between SPOM and scallops...
Tipo: Text Palavras-chave: Trophic; Coastal; Bivalves; Food web; Bay of Biscay.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00288/39921/38481.pdf
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Evaluating the potential impact of fishing on demersal species in the Bay of Biscay using simulations and survey data ArchiMer
Ravard, David; Brind'Amour, Anik; Trenkel, Verena.
Fishing affects fish populations through direct and indirect effects. It can change size structures and/or modify population mean weights. Reference values are thus needed to assess the status of populations in exploited ecosystems. These reference values can either be set by a historical approach, i.e. using information from before the onset of exploitation or overexploitation, or by a simulation approach. Using a model based on life-history parameters, we predicted population mean weights and length structures at equilibrium (in the absence of fishing and for fishing equal to different fishing mortalities) which we compared with contemporary data collected during scientific surveys in the Bay of Biscay. Contemporary mean weights were 88% to 30% smaller...
Tipo: Text Palavras-chave: Indicators; Fishing impacts; Ecosystem based management; Fish community; Reference points; Northeast Atlantic.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00188/29968/28485.pdf
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Comparative study of isotopic trends in two coastal ecosystems of North Biscay: A multitrophic spatial gradient approach ArchiMer
Mortillaro, J. M.; Schaal, G.; Grall, Jacques; Nerot, C.; Brind'Amour, Anik; Marchais, V.; Perdriau, M.; Le Bris, H..
In coastal estuarine embayments, retention of water masses due to coastal topography may result in an increased contribution of continental organic matter in food webs. However, in megatidal embayments, the effect of topography can be counterbalanced by the process of tidal mixing. Large amounts of continental organic matter are exported each year by rivers to the oceans. The fate of terrestrial organic matter in food webs of coastal areas and on neighboring coastal benthic communities was therefore evaluated, at multi-trophic levels, from primary producers to primary consumers and predators. Two coastal areas of the French Atlantic coast, differing in the contributions from their watershed, tidal range and aperture degree, were compared using carbon and...
Tipo: Text Palavras-chave: Bay of Brest; Bay of Vilaine; Benthic; Filter-feeders; Stable isotopes; Organic matter.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00167/27847/26203.pdf
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