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Development of GCP Ontology for Sharing Crop Information Nature Precedings
Rosemary Shrestha; Ramil Mauleon; Reinhard Simon; Jayashree Balaji; Stephanie Channelière; Adriana Alercia; Martin Senger; Kevin Manansala; Thomas Metz; Guy Davenport; Richard Bruskiewich; Graham McLaren; Elizabeth Arnaud.
The Generation Challenge Programme (GCP – "http://www.generationcp.org":http://www.generationcp.org) is a globally distributed crop research consortium directed toward crop improvement through the application of comparative biology and genetic resources characterization to plant breeding. GCP adopted the development paradigm of a ‘model-driven architecture’ to achieve the interoperability and integration of diverse GCP data types that are available through distributed data sources and consumed by end-user data analysis tools. Its objective is to ensure semantic compatibility across the Consortium that will lead to the creation of robust global public goods from GCP research results....
Tipo: Poster Palavras-chave: Bioinformatics; Plant Biology.
Ano: 2009 URL: http://precedings.nature.com/documents/3087/version/1
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Ontology-driven International Maize Information System (IMIS) for Phenotypic and Genotypic Data Exchange Nature Precedings
Rosemary Shrestha; Hector Sanchez; Claudio Ayala; Peter Wenzl; Elizabeth Arnaud.
The Consultative Group on International Agricultural Research (CGIAR; http://www.cgiar.org/) centres have developed the International Crop Information System (ICIS; http://www.icis.cgiar.org) for the management and integration of global information on genetic resources, and germplasm improvement for any crop. The Maize breeding programs at CIMMYT (http://beta.cimmyt.org/) have different software tools to manage phenotypic, genotypic, and environmental information for their experiments generated worldwide. These tools have the capacity of collecting information in the field, wet lab, and store it into different relational databases. The IMIS (http://imis.cimmyt.org/confluence/display/IMIS/Crop+Finder) is an implementation of the ICIS, which is a...
Tipo: Poster Palavras-chave: Bioinformatics; Plant Biology; Data Standards.
Ano: 2010 URL: http://precedings.nature.com/documents/5029/version/1
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