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Combination of meta-analysis and graph clustering to identify prognostic markers of ESCC Genet. Mol. Biol.
Gao,Hongyun; Wang,Lishan; Cui,Shitao; Wang,Mingsong.
Esophageal squamous cell carcinoma (ESCC) is one of the most malignant gastrointestinal cancers and occurs at a high frequency rate in China and other Asian countries. Recently, several molecular markers were identified for predicting ESCC. Notwithstanding, additional prognostic markers, with a clear understanding of their underlying roles, are still required. Through bioinformatics, a graph-clustering method by DPClus was used to detect co-expressed modules. The aim was to identify a set of discriminating genes that could be used for predicting ESCC through graph-clustering and GO-term analysis. The results showed that CXCL12, CYP2C9, TGM3, MAL, S100A9, EMP-1 and SPRR3 were highly associated with ESCC development. In our study, all their predicted roles...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Esophageal squamous cell carcinoma; Meta-analysis; Graph clustering.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000300021
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