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Registros recuperados: 8
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Selection on length mutations after frameshift can explain the origin and retention of the AP3/DEF-like paralogues in Impatiens Naturalis
Janssens, S.; Viaene, T.; Huysmans, S.; Huysmans, S.; Smets, E.F.; Geuten, K..
Evolution of class B genes through gene duplication has been proposed as an evolutionary mechanism that contributed to the enormous floral diversity. Frameshift mutations are a likely mechanism to explain the divergent C-terminal sequences of MIKC gene subfamilies. So far, the inferences for frameshifts and selective pressures on the C-terminal domain are made for old duplications for which the exact selective pressures are obscured by evolutionary time. This motivated us to study an example of a recent duplication, which allows us to consider in more detail the selective pressures that are involved after duplication. We find that after duplication and frameshift of Impatiens class B genes, the individual codons show no evidence for adaptive selection. It...
Tipo: Article / Letter to the editor Palavras-chave: APETALA3 /DEFICIENS C-terminal domain frameshift gene duplication impatiens selection indels 42.43; 42.58.
Ano: 2008 URL: http://www.repository.naturalis.nl/record/449548
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Phylogenetic utility of the AP3/DEF K-domain and its molecular evolution in Impatiens (Balsaminaceae) Naturalis
Janssens, S.; Geuten, K.; Viaene, T.; Yong-Ming, Y.; Yi, S.; Smets, E..
APETALA3 (AP3)/DEFICIENS (DEF) is a MADS-box transcription factor that is involved in establishing the identity of petal and stamen floral organs. The AP3/DEF gene lineage has been extensively examined throughout the angiosperms in order to better understand its role in floral diversity and evolution. As a result, a large number of cloned AP3/DEF orthologues are available, which can be used for the design of taxon specific primers for phylogeny reconstruction of close relatives of the group of interest. Following this reasoning, we investigated the phylogenetic utility of the two AP3/DEF paralogues (ImpDEF1 and ImpDEF2) that were recently identified in the genus Impatiens (Balsaminaceae). K-domain introns 4 and 5 of both AP3/DEF duplicates were amplified...
Tipo: Article / Letter to the editor Palavras-chave: APETALA3/DEFICIENS; Gene duplication; Impatiens; ImpDEF1; ImpDEF2; K-domain; Phylogenetic utility; 42.48.
Ano: 2007 URL: http://www.repository.naturalis.nl/record/422232
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Phylogenetics of Impatiens and Hydrocera (Balsaminaceae) using chloroplast atpB-rbcL spacer sequences Naturalis
Janssens, S.; Geuten, K.; Yuan, Y.; Song, Y.; Küpfer, P.; Smets, E..
Balsaminaceae are a morphologically diverse family with ca. 1,000 representatives that are mainly distributed in the Old World tropics and subtropics. To understand the relationships of its members, we obtained chloroplast atpB-rbcL sequences from 86 species of Balsaminaceae and five outgroups. Phylogenetic reconstructions using parsimony and Bayesian approaches provide a well-resolved phylogeny in which the sister group relationship between Impatiens and Hydrocera is confirmed. The overall topology of Impatiens is strongly supported and is geographically structured. Impatiens likely originated in South China from which it colonized the adjacent regions and afterwards dispersed into North America, Africa, India, the Southeast Asian peninsula, and the...
Tipo: Article / Letter to the editor Palavras-chave: Balsaminaceae; Phylogeny; Reconstruction; Sister group relationship; Impatiens; Hydrocera.
Ano: 2006 URL: http://www.repository.naturalis.nl/record/407352
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Petaloidy and petal identity MADS-box genes in the balsaminoid genera Impatiens and Marcgravia Naturalis
Geuten, K.; Becker, A.; Kaufmann, K.; Caris, P.; Janssens, S.; Viaene, T.; Theißen, G.; Smets, E..
Impatiens and Marcgravia have striking morphological innovations associated with the flowers. One of the sepals in Impatiens is spurred and petaloid, while in Marcgravia the petals are fused into a cap and nectary cups are associated with the inflorescence. Balsaminaceae (Impatiens) and Marcgraviaceae have surprisingly been shown to be closely related, since both belong to the balsaminoid clade of Ericales (basal asterids). However, several thorough morphological studies thus far have not revealed shared derived characters (synapomorphies) that support a close relationship between these families. In the balsaminoid clade, transitions from entirely green flowers to flowers with heterotopic petaloid organs can be observed. The primary role of class B genes...
Tipo: Article / Letter to the editor Palavras-chave: SEPALLATA3; Class B genes; Petal identity; MADS-box genes; Impatiens; Marcgravia.
Ano: 2006 URL: http://www.repository.naturalis.nl/record/407348
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Gomphocalyx and Phylohydrax (Rubiaceae): sister taxa excluded from Spermacoceae s.s., featuring a remarkable case of convergent evolution Naturalis
Dessein, S.; Andersson, L.; Geuten, K.; Smets, E.; Robbrecht, E..
The genera Gomphocalyx and Phylohydrax (Rubiaceae) have been invariably placed in the tribe Spermacoceae s.s. based on the uni-ovulate ovary locules and pluri-aperturate pollen grains. Sequence data from the rps16 intron and the rbcL gene here presented exclude Gomphocalyx and Phylohydrax from Spermacoceae s.s. The two genera are closely related and their nearest relatives are found among members of the former tribe Hedyotideae. This position may be surprising at first, because the growth form of Phylohydrax is similar to some observed in Spermacoceae s.s. A detailed survey of morphological and anatomical characters shows, however, that the character states of the two genera are largely consistent with the here-proposed position in Hedyotideae. The...
Tipo: Article / Letter to the editor Palavras-chave: Convergent evolution; Gomphocalyx; Hydrophylax; Phylohydrax; Rubiaceae; Spermacoceae.
Ano: 2005 URL: http://www.repository.naturalis.nl/record/407302
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Palynological Variation in Balsaminoid Ericales. II. Balsaminaceae, Tetrameristaceae, Pellicieraceae and General Conclusions Naturalis
Janssens, S.; Lens, F.; Dressler, S.; Geuten, K.; Smets, E.; Vinckier, S..
Background and Aims The objective of this study is to examine the palynological diversity of Balsaminaceae (two genera/61000 species), Tetrameristaceae (two genera/two species) and Pellicieraceae (one genus/one species). The diversity found will be used to infer the systematic value of pollen features within the balsaminoid clade. Methods Pollen morphology and ultrastructure of 29 species, representing all families of the balsaminoid clade except Marcgraviaceae, are investigated by means of light microscopy, scanning electron microscopy and transmission electron microscopy. Key Results Balsaminaceae pollen is small to medium sized with three to four apertures, which can be either colpate or porate, and a sexine sculpturing varying from coarsely...
Tipo: Article / Letter to the editor Palavras-chave: Balsaminaceae; Ericales; Orbicules; Pellicieraceae; Pollen; SEM; TEM; Tetrameristaceae.
Ano: 2005 URL: http://www.repository.naturalis.nl/record/407278
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Phylogenetic relationships in Nartheciaceae (Dioscoreales), with focus on pollen and orbicule morphology Naturalis
Merckx, V.; Schols, P.; Geuten, K.; Huysmans, S.; Smets, E.F..
Amolecular phylogenetic analysis of Nartheciaceae is presented, with nine species of the family’s five genera. The main phylogenetic findings are: (a) Nietneria and Narthecium are placed in a clade sister to Lophiola; (b) sister to the Lophiola-Narthecium- Nietneria clade is a clade formed by Aletris and the monospecific Metanarthecium; (c) the inclusion of Metanarthecium luteo-viride in Aletris, as proposed by several authors, is well supported. The pollen and orbicule morphology of representatives of five genera is described. The results underline a close relationship between Nietneria, Narthecium, and Lophiola and confirm the previously reported observations of Metanarthecium pollen and the types of sexine ornamentation in Aletris. Pollen grains of...
Tipo: Article / Letter to the editor Palavras-chave: Dioscoreales Nartheciaceae Nietneria molecular phylogeny orbicules pollen morphology 42.43; 42.48; 42.57.
Ano: 2008 URL: http://www.repository.naturalis.nl/record/449539
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The distribution and phylogeny of aluminium accumulating plants in the Ericales Naturalis
Jansen, S.; Watanabe, T.; Caris, P.; Geuten, K.; Lens, F.; Pyck, N.; Smets, E..
The distribution of aluminium (Al) accumulation in the Ericales is surveyed, based on semi-quantitative tests of 114 species and literature data. Al accumulation mainly characterises the families Diapensiaceae, Pentaphylacaceae, Symplocaceae, Ternstroemiaceae, and Theaceae. Al accumulation is consistently present or absent in most families examined, but the character appears to be more variable in a few taxa (e.g., Lecythidaceae, Myrsinaceae). Although the interfamilial relationships within the Ericales require further research, the ability to accumulate high levels of Al appears to show considerable taxonomic significance. While the majority of Al accumulating Ericales includes woody, tropical plants, the feature is remarkably present in several...
Tipo: Article / Letter to the editor Palavras-chave: Aluminium accumulation; Ericales; Phyogeny; Diapensiaceae; Pentaphylacaceae; Symplocaceae; Ternstroemiaceae; Theaceae; 42.56.
Ano: 2004 URL: http://www.repository.naturalis.nl/record/431739
Registros recuperados: 8
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