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There's no harm in having too much: A comprehensive toolbox of methods in trophic ecology ArchiMer
Majdi, Nabil; Hette-tronquart, Nicolas; Auclair, Etienne; Bec, Alexandre; Chouvelon, Tiphaine; Cognie, Bruno; Danger, Michael; Decottignies, Priscilla; Dessier, Aurélie; Desvilettes, Christian; Dubois, Stanislas; Dupuy, Christine; Fritsch, Clémentine; Gaucherel, Cédric; Hedde, Mickaël; Jabot, Franck; Lefebvre, Sebastien; Marzloff, Martin; Pey, Benjamin; Peyrard, Nathalie; Powolny, Thibaut; Sabbadin, Régis; Thébault, Elisa; Perga, Marie-elodie.
Trophic ecology is the study of feeding interactions and food acquisition by organisms. It includes the causes and consequences of those behaviours at all levels of biological organisation. As a field of research, it crosses many disciplinary boundaries and provides knowledge that is pertinent to many other areas of ecology. Here we list and categorise the methods available to trophic ecologists whose toolbox has broadened considerably in recent years. They encompass empirical and numerical approaches with focus ranging from molecules to ecosystems. We further examine the relationship of each method to features such as the scale of observation (from microbes to largest organisms) and organisational level (from individuals to ecosystems) as well as the...
Tipo: Text Palavras-chave: Food web; Feeding interactions; Flux of energy; Computer simulations; Trophic models.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00487/59834/65986.pdf
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Forces, failles et opportunités de la recherche française en écologie trophique ArchiMer
Perga, Marie-elodie; Danger, Michael; Dubois, Stanislas; Fritch, Clementine; Gaucherel, Cedric; Hubas, Cedric; Jabot, Franck; Lacroix, Gerard; Lefebvre, Sebastien; Marmonier, Pierre; Bec, Alexandre.
The French National Institute of Ecology and Environment (INEE) aims at fostering pluridisciplinarity in Environmental Science and, for that purpose, funds ex muros research groups (GDR) on thematic topics. Trophic ecology has been identified as a scientific field in ecology that would greatly benefit from such networking activity, as being profoundly scattered. This has motivated the seeding of a GDR, entitled “GRET”. The contours of the GRET's action, and its ability to fill these gaps within trophic ecology at the French national scale, will depend on the causes of this relative scattering. This study relied on a nationally broadcasted poll aiming at characterizing the field of trophic ecology in France. Amongst all the unique individuals that fulfilled...
Tipo: Text Palavras-chave: Trans-ecosystem; Scientific network; Cleavage; Ecology; Population; Community.
Ano: 2018 URL: http://archimer.ifremer.fr/doc/00442/55338/56849.pdf
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Are food web structures well represented in isotopic spaces? ArchiMer
Jabot, Franck; Giraldo, Carolina; Lefebvre, Sebastien; Dubois, Stanislas.
Isotopic analyses are increasingly used to assess the structure of food webs and a series of isotopic functional indices have been proposed in the last decade to characterize this structure. These indices are based on the foundational assumption that proximity in the isotopic space informs on trophic similarity between species. While it has been recognized for long that this simplifying assumption should be used with caution, no formal evaluation of its domain of validity has been performed to date. We here simulate a large number (15,000) of food webs with varying characteristics to assess i) whether isotopic distance is a good proxy of trophic dissimilarity; ii) whether isotopic functional indices are good proxies of trophic functional properties; and...
Tipo: Text Palavras-chave: Connectance; Isotopic functional indices; Niche model; Omnivory; Virtual ecology.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00385/49596/50110.pdf
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