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Towards multidisciplinary indicator dashboards for coral reef fisheries management ArchiMer
Clua, Eric; Beliaeff, Benoit; Chauvet, Claude; David, Gilbert; Ferraris, Jocelyne; Kronen, Mekhi; Kulbicki, Michel; Labrosse, Pierre; Letourneur, Yves; Pelletier, Dominique; Thebaud, Olivier; Leopold, Marc.
The diversity of reef ecosystems, the multiplicity of reef resource uses and the breadth of the range of the island socio-cultural contexts concerned make coral reef fisheries (CRF) management in the South Pacific a complex task. The health and state of the targeted resources depend both on ecosystem characteristics (as determined by ecological and biological factors) and on fishing pressure, whose effects are only partly known. Increasing harvests from commercial and recreational fishing increasingly overlap with traditional Subsistence activity, creating an important CRF management challenge. This paper presents a new approach to CRF assessment and monitoring by providing a set of multidisciplinary indicators. The fisheries system is assessed from three...
Tipo: Text Palavras-chave: Dashboard; Indicators; Co management; Fishing; Coral reefs.
Ano: 2005 URL: https://archimer.ifremer.fr/doc/2005/publication-716.pdf
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Plate tectonics drive tropical reef biodiversity dynamics ArchiMer
Leprieur, Fabien; Descombes, Patrice; Gaboriau, Theo; Cowman, Peter F.; Parravicini, Valeriano; Kulbicki, Michel; Melian, Carlos J.; De Santana, Charles N.; Heine, Christian; Mouillot, David; Bellwood, David R.; Pellissier, Loic.
The Cretaceous breakup of Gondwana strongly modified the global distribution of shallow tropical seas reshaping the geographic configuration of marine basins. However, the links between tropical reef availability, plate tectonic processes and marine biodiversity distribution patterns are still unknown. Here, we show that a spatial diversification model constrained by absolute plate motions for the past 140 million years predicts the emergence and movement of diversity hotspots on tropical reefs. The spatial dynamics of tropical reefs explains marine fauna diversification in the Tethyan Ocean during the Cretaceous and early Cenozoic, and identifies an eastward movement of ancestral marine lineages towards the Indo-Australian Archipelago in the Miocene. A...
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Ano: 2016 URL: https://archimer.ifremer.fr/doc/00337/44814/74255.pdf
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Designing indicators for assessing the effects of marine protected areas on coral reef ecosystems: A multidisciplinary standpoint ArchiMer
Pelletier, Dominique; Garcia Charton, Jose; Ferraris, Jocelyne; David, Gilbert; Thebaud, Olivier; Letourneur, Yves; Claudet, Joachim; Amand, Marion; Kulbicki, Michel; Galzin, René.
The present paper aims at identifying and assessing indicators of the effects of Marine Protected Areas (MPAs) in coral reef regions, based on a bibliography review in ecology, economics and social sciences. First the various effects Studied within each of these domains and the variables used to measure them were censused. Potential ecological indicators were assessed through their link with the question used (here termed "relevance") and their "effectiveness" which encompasses the issues of precision, accuracy and statistical power. Relevance and effectiveness were respectively measured by the frequency of use of each indicator and the proportion of significant results in the reviewed articles. For social and economic effects, the approach was not...
Tipo: Text Palavras-chave: Coastal management Coral reef ecosystems Pluridisciplinary Ecological; Economic and social indicators Marine Protected Areas.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/publication-409.pdf
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Environmental DNA illuminates the dark diversity of sharks ArchiMer
Boussarie, Germain; Bakker, Judith; Wangensteen, Owen S.; Mariani, Stefano; Bonnin, Lucas; Juhel, Jean-baptiste; Kiszka, Jeremy J.; Kulbicki, Michel; Manel, Stephanie; Robbins, William D.; Vigliola, Laurent; Mouillot, David.
In the era of "Anthropocene defaunation," large species are often no longer detected in habitats where they formerly occurred. However, it is unclear whether this apparent missing, or "dark," diversity of megafauna results from local species extirpations or from failure to detect elusive remaining individuals. We find that despite two orders of magnitude less sampling effort, environmental DNA (eDNA) detects 44% more shark species than traditional underwater visual censuses and baited videos across the New Caledonian archipelago (south-western Pacific). Furthermore, eDNA analysis reveals the presence of previously unobserved shark species in human-impacted areas. Overall, our results highlight a greater prevalence of sharks than described by traditional...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00442/55321/56837.pdf
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Comptage visuel de poissons en plongée : conditions d'utilisation et de mise en oeuvre ArchiMer
Labrosse, Pierre; Kulbicki, Michel; Ferraris, Jocelyne.
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Ano: 2001 URL: https://archimer.ifremer.fr/doc/00609/72082/70799.pdf
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Extent of Mangrove Nursery Habitats Determines the Geographic Distribution of a Coral Reef Fish in a South-Pacific Archipelago ArchiMer
Paillon, Christelle; Wantiez, Laurent; Kulbicki, Michel; Labonne, Maylis; Vigliola, Laurent.
Understanding the drivers of species' geographic distribution has fundamental implications for the management of biodiversity. For coral reef fishes, mangroves have long been recognized as important nursery habitats sustaining biodiversity in the Western Atlantic but there is still debate about their role in the Indo-Pacific. Here, we combined LA-ICP-MS otolith microchemistry, underwater visual censuses (UVC) and mangrove cartography to estimate the importance of mangroves for the Indo-Pacific coral reef fish Lutjanus fulviflamma in the archipelago of New Caledonia. Otolith elemental compositions allowed high discrimination of mangroves and reefs with 83.8% and 98.7% correct classification, respectively. Reefs were characterized by higher concentrations of...
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Ano: 2014 URL: https://archimer.ifremer.fr/doc/00221/33271/35756.pdf
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Meeting fisheries, ecosystem function, and biodiversity goals in a human-dominated world ArchiMer
Cinner, Joshua E.; Zamborain-mason, Jessica; Gurney, Georgina G.; Graham, Nicholas A. J.; Macneil, M. Aaron; Hoey, Andrew S.; Mora, Camilo; Villéger, Sébastien; Maire, Eva; Mcclanahan, Tim R.; Maina, Joseph M.; Kittinger, John N.; Hicks, Christina C.; D’agata, Stephanie; Huchery, Cindy; Barnes, Michele L.; Feary, David A.; Williams, Ivor D.; Kulbicki, Michel; Vigliola, Laurent; Wantiez, Laurent; Edgar, Graham J.; Stuart-smith, Rick D.; Sandin, Stuart A.; Green, Alison L.; Beger, Maria; Friedlander, Alan M.; Wilson, Shaun K.; Brokovich, Eran; Brooks, Andrew J.; Cruz-motta, Juan J.; Booth, David J.; Chabanet, Pascale; Tupper, Mark; Ferse, Sebastian C. A.; Sumaila, U. Rashid; Hardt, Marah J.; Mouillot, David.
The worldwide decline of coral reefs necessitates targeting management solutions that can sustain reefs and the livelihoods of the people who depend on them. However, little is known about the context in which different reef management tools can help to achieve multiple social and ecological goals. Because of nonlinearities in the likelihood of achieving combined fisheries, ecological function, and biodiversity goals along a gradient of human pressure, relatively small changes in the context in which management is implemented could have substantial impacts on whether these goals are likely to be met. Critically, management can provide substantial conservation benefits to most reefs for fisheries and ecological function, but not biodiversity goals, given...
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Ano: 2020 URL: https://archimer.ifremer.fr/doc/00623/73532/72911.pdf
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Basic Principles Underlying Research Projects on the Links between the Ecology and the Uses of Coral Reef Fishes in the Pacific ArchiMer
Kulbicki, Michel; Labrosse, Pierre; Ferraris, Jocelyne.
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Ano: 2004 URL: https://archimer.ifremer.fr/doc/00609/72083/70801.pdf
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Rare Species Support Vulnerable Functions in High-Diversity Ecosystems ArchiMer
Mouillot, David; Bellwood, David R.; Baraloto, Christopher; Chave, Jerome; Galzin, Rene; Harmelin-vivien, Mireille; Kulbicki, Michel; Lavergne, Sebastien; Lavorel, Sandra; Mouquet, Nicolas; Paine, C. E. Timothy; Renaud, Julien; Thuiller, Wilfried.
Around the world, the human-induced collapses of populations and species have triggered a sixth mass extinction crisis, with rare species often being the first to disappear. Although the role of species diversity in the maintenance of ecosystem processes has been widely investigated, the role of rare species remains controversial. A critical issue is whether common species insure against the loss of functions supported by rare species. This issue is even more critical in species-rich ecosystems where high functional redundancy among species is likely and where it is thus often assumed that ecosystem functioning is buffered against species loss. Here, using extensive datasets of species occurrences and functional traits from three highly diverse ecosystems...
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Ano: 2013 URL: https://archimer.ifremer.fr/doc/00144/25506/60251.pdf
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Low fuel cost and rising fish price threaten coral reef wilderness ArchiMer
Januchowski‐hartley, Fraser A.; Vigliola, Laurent; Maire, Eva; Kulbicki, Michel; Mouillot, David.
Wilderness areas offer unparalleled ecosystem conditions. However, growing human populations and consumption are among factors that drive encroachment on these areas. Here, we explore the threat of small‐scale fisheries to wilderness reefs by developing a framework and modeling fluctuations in fishery range with fuel costs and fish prices. We modeled biomass of four fishery groups across the New Caledonian archipelago, and used fish and fuel prices from 2005 to 2020 to estimate the extent of exploited reefs across three fishing scenarios.  From 2012 to 2018, maximum profitable range increased from 15 to over 30 hr from the capital city, expanding to reefs previously uneconomic to fish, including a UNESCO heritage site. By 2020, over half of New Caledonian...
Tipo: Text Palavras-chave: Coral reef conservation; Fisheries management; Reef accessibility; Small‐scale fisheries; South Pacific.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00607/71887/70585.pdf
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Considering multiple-species attributes to understand better the effects of successive changes in protection status on a coral reef fish assemblage ArchiMer
Preuss, Bastien; Pelletier, Dominique; Wantiez, Laurent; Letourneur, Yves; Sarramegna, Sebastien; Kulbicki, Michel; Galzin, Rene; Ferraris, Jocelyne.
The response of fish assemblages to changes in protection status is a major issue for both biodiversity conservation and fishery management. In New Caledonia, the Abore reef marine reserve harbours more than 500 fish species, and has been subjected to changes in protection status since 1988. The present study investigates the impact of these changes on a wide subset of species (213), based on underwater visual counts collected before the opening and after the closure to fishing of this marine protected area (MPA). We analysed the spatial and temporal variability in fish assemblage attributable to protection status, explicitly considering habitat. To understand the successive responses of fish assemblage to fishing and protection, the assessment models...
Tipo: Text Palavras-chave: MPA effect; Fishing effect; Fish assemblage; Coral reef ecosystem; Assessment model.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6130.pdf
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A step toward the definition of ecological indicators of the impact of fishing on the fish assemblage of the Abore reef reserve (New Caledonia) ArchiMer
Amand, Marion; Pelletier, Dominique; Ferrari, Jocelyne; Kulbicki, Michel.
Marine Protected Areas (MPA) are often contemplated as a tool for the sustainable management of exploited resources and ecosystem conservation. This paper proposes an approach to establish a statistical diagnostic of the effects of MPAs on fish assemblages, and define corresponding ecological indicators. This requires choosing relevant variables (abundance, diversity, demographic parameters..) and appropriate statistical methods. The study was based on data from the Abore reef Reserve in New Caledonia. Two sets of methods: 1-inferential linear models (ANOVA, GLM): 2- Partial Least Squares (PLS) methods of regression, were used to test the effects of this MPA. PLS enabled us to test simultaneously within a model, density, species richness, biomass and mean...
Tipo: Text Palavras-chave: New Caledonia; PLS regression; Ecological indicators; Fishing impact; Coral reef; Fish; Marine Protected Areas.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/2004/publication-398.pdf
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Gravity of human impacts mediates coral reef conservation gains ArchiMer
Cinner, Joshua E.; Maire, Eva; Huchery, Cindy; Macneil, M. Aaron; Graham, Nicholas A. J.; Mora, Camilo; Barnes, Michele L.; Kittinger, John N.; Hicks, Christina C.; D'Agata, Stephanie; Hoey, Andrew S.; Gurney, Georgina G.; Feary, David A.; Williams, Ivor D.; Kulbicki, Michel; Vigliola, Laurent; Wantiez, Laurent; Edgar, Graham J.; Stuart-smith, Rick D.; Sandin, Stuart A.; Green, Alison; Hardt, Marah J.; Beger, Maria; Friedlander, Alan M.; Wilson, Shaun K.; Brokovich, Eran; Brooks, Andrew J.; Cruz-motta, Juan J.; Booth, David J.; Chabanet, Pascale; Gough, Charlotte; Tupper, Mark; Ferse, Sebastian C. A.; Sumaila, U. Rashid; Pardede, Shinta; Mouillot, David.
Coral reefs provide ecosystem goods and services for millions of people in the tropics, but reef conditions are declining worldwide. Effective solutions to the crisis facing coral reefs depend in part on understanding the context under which different types of conservation benefits can be maximized. Our global analysis of nearly 1,800 tropical reefs reveals how the intensity of human impacts in the surrounding seascape, measured as a function of human population size and accessibility to reefs ("gravity"), diminishes the effectiveness of marine reserves at sustaining reef fish biomass and the presence of top predators, even where compliance with reserve rules is high. Critically, fish biomass in high-compliance marine reserves located where human impacts...
Tipo: Text Palavras-chave: Marine reserves; Fisheries; Coral reefs; Social-ecological; Socioeconomic.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00450/56115/68021.pdf
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Isolation drives taxonomic and functional nestedness in tropical reef fish faunas ArchiMer
Bender, Mariana G.; Leprieur, Fabien; Mouillot, David; Kulbicki, Michel; Parravicini, Valeriano; Pie, Marcio R.; Barneche, Diego R.; Oliveira-santos, Luiz Gustavo R.; Floeter, Sergio R..
Taxonomic nestedness, the degree to which the taxonomic composition of species-poor assemblages represents a subset of richer sites, commonly occurs in habitat fragments and islands differing in size and isolation from a source pool. However, species are not ecologically equivalent and the extent to which nestedness is observed in terms of functional trait composition of assemblages still remains poorly known. Here, using an extensive database on the functional traits and the distributions of 6316 tropical reef fish species across 169 sites, we assessed the levels of taxonomical vs functional nestedness of reef fish assemblages at the global scale. Functional nestedness was considerably more common than taxonomic nestedness, and generally associated with...
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Ano: 2017 URL: https://archimer.ifremer.fr/doc/00625/73725/74695.pdf
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Adult and larval traits as determinants of geographic range size among tropical reef fishes ArchiMer
Luiz, Osmar J.; Allen, Andrew P.; Robertson, D. Ross; Floeter, Sergio R.; Kulbicki, Michel; Vigliola, Laurent; Becheler, Ronan; Madin, Joshua S..
Most marine organisms disperse via ocean currents as larvae, so it is often assumed that larval-stage duration is the primary determinant of geographic range size. However, empirical tests of this relationship have yielded mixed results, and alternative hypotheses have rarely been considered. Here we assess the relative influence of adult and larval-traits on geographic range size using a global dataset encompassing 590 species of tropical reef fishes in 47 families, the largest compilation of such data to date for any marine group. We analyze this database using linear mixed-effect models to control for phylogeny and geographical limits on range size. Our analysis indicates that three adult traits likely to affect the capacity of new colonizers to survive...
Tipo: Text Palavras-chave: Macroecology; Marine dispersal; Colonization.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00161/27240/25457.pdf
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Distribution spatiale des stocks de poissons récifaux démersaux d'intérêt commercial et effort de pêche en Province Nord de Nouvelle-Calédonie (Pacifique occidental) ArchiMer
Letourneur, Yves; Labrosse, Pierre; Kulbicki, Michel.
Fish from lagoon and reef in New Caledonia are mainly caught by artisanal fisheries and subsistence fishing. The present study aimed at estimating these fish standing stocks, at finding the main factors influencing the spatial distribution of these fish, and at estimating the maximum sustainable yield with considerations for socio-economic aspects sensu late. A total of 1406 stations was surveyed in the Northern Province of New Caledonia. Sampling was stratified according to three zones (north, east and west) and three biotopes (coral reefs, near-reef areas and lagoon bottoms). This work demonstrates the existence of important fish stocks of commercial interest in reefal and lagoonal waters of the Northern Province, estimated at about 138 300 t. The...
Tipo: Text Palavras-chave: Ichtyofaune démersale; Récifs coralliens; Fonds de lagon; Pêche artisanale; Stocks; Demersal ichthyofauna; Coral reefs; Lagoon bottoms; Artisanal fishing; Standing stocks.
Ano: 2000 URL: https://archimer.ifremer.fr/doc/00323/43383/42827.pdf
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Marine reserves lag behind wilderness in the conservation of key functional roles ArchiMer
D'Agata, Stephanie; Mouillot, David; Wantiez, Laurent; Friedlander, Alan M.; Kulbicki, Michel; Vigliola, Laurent.
Although marine reserves represent one of the most effective management responses to human impacts, their capacity to sustain the same diversity of species, functional roles and biomass of reef fishes as wilderness areas remains questionable, in particular in regions with deep and long-lasting human footprints. Here we show that fish functional diversity and biomass of top predators are significantly higher on coral reefs located at more than 20 h travel time from the main market compared with even the oldest (38 years old), largest (17,500 ha) and most restrictive (no entry) marine reserve in New Caledonia (South-Western Pacific). We further demonstrate that wilderness areas support unique ecological values with no equivalency as one gets closer to...
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Ano: 2016 URL: https://archimer.ifremer.fr/doc/00346/45742/45379.pdf
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A DNA barcode reference library of French Polynesian shore fishes ArchiMer
Delrieu-trottin, Erwan; Williams, Jeffrey T.; Pitassy, Diane; Driskell, Amy; Hubert, Nicolas; Viviani, Jeremie; Cribb, Thomas H.; Espiau, Benoit; Galzin, Rene; Kulbicki, Michel; De Loma, Thierry Lison; Meyer, Christopher; Mourier, Johann; Mou-tham, Gerard; Parravicini, Valeriano; Plantard, Patrick; Sasal, Pierre; Siu, Gilles; Tolou, Nathalie; Veuille, Michel; Weigt, Lee; Planes, Serge.
The emergence of DNA barcoding and metabarcoding opened new ways to study biological diversity, however, the completion of DNA barcode libraries is fundamental for such approaches to succeed. This dataset is a DNA barcode reference library (fragment of Cytochrome Oxydase I gene) for 2,190 specimens representing at least 540 species of shore fishes collected over 10 years at 154 sites across the four volcanic archipelagos of French Polynesia; the Austral, Gambier, Marquesas and Society Islands, a 5,000,000 km(2) area. At present, 65% of the known shore fish species of these archipelagoes possess a DNA barcode associated with preserved, photographed, tissue sampled and cataloged specimens, and extensive collection locality data. This dataset represents one...
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00508/61942/66026.pdf
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Responses of coral reef fishes to past climate changes are related to life-history traits ArchiMer
Ottimofiore, Eduardo; Albouy, Camille; Leprieur, Fabien; Descombes, Patrice; Kulbicki, Michel; Mouillot, David; Parravicini, Valeriano; Pellissier, Loic.
Coral reefs and their associated fauna are largely impacted by ongoing climate change. Unravelling species responses to past climatic variations might provide clues on the consequence of ongoing changes. Here, we tested the relationship between changes in sea surface temperature and sea levels during the Quaternary and present-day distributions of coral reef fish species. We investigated whether species-specific responses are associated with life-history traits. We collected a database of coral reef fish distribution together with life-history traits for the Indo-Pacific Ocean. We ran species distribution models (SDMs) on 3,725 tropical reef fish species using contemporary environmental factors together with a variable describing isolation from stable...
Tipo: Text Palavras-chave: Climate change; Dispersal; Indo-Pacific Ocean; Species distribution models.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00373/48403/48607.pdf
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Bright spots among the world's coral reefs ArchiMer
Cinner, Joshua E.; Huchery, Cindy; Macneil, M. Aaron; Graham, Nicholas A. J.; Mcclanahan, Tim R.; Maina, Joseph; Maire, Eva; Kittinger, John N.; Hicks, Christina C.; Mora, Camilo; Allison, Edward H.; D'Agata, Stephanie; Hoey, Andrew; Feary, David A.; Crowder, Larry; Williams, Ivor D.; Kulbicki, Michel; Vigliola, Laurent; Wantiez, Laurent; Edgar, Graham; Stuart-smith, Rick D.; Sandin, Stuart A.; Green, Alison L.; Hardt, Marah J.; Beger, Maria; Friedlander, Alan; Campbell, Stuart J.; Holmes, Katherine E.; Wilson, Shaun K.; Brokovich, Eran; Brooks, Andrew J.; Cruz-motta, Juan J.; Booth, David J.; Chabanet, Pascale; Gough, Charlie; Tupper, Mark; Ferse, Sebastian C. A.; Sumaila, U. Rashid; Mouillot, David.
Ongoing declines in the structure and function of the world's coral reefs(1,2) require novel approaches to sustain these ecosystems and the millions of people who depend on them(3). A presently unexplored approach that draws on theory and practice in human health and rural development(4,5) is to systematically identify and learn from the 'outliers'-places where ecosystems are substantially better ('bright spots') or worse ('dark spots') than expected, given the environmental conditions and socioeconomic drivers they are exposed to. Here we compile data from more than 2,500 reefs worldwide and develop a Bayesian hierarchical model to generate expectations of how standing stocks of reef fish biomass are related to 18 socioeconomic drivers and environmental...
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Ano: 2016 URL: https://archimer.ifremer.fr/doc/00348/45872/68023.pdf
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