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Immunologic cross-reactivity between Muscovy duck parvovirus and goose parvovirus on the basis of epitope prediction BJM
Li,Ming; Yu,Tian-fei.
Through bioinformatic prediction, between Muscovy duck parvovirus (MDPV) and goose parvovirus (GPV), there were one epitope AA503-509 (RANEPKE) on non-structural protein and three epitopes AA426-430 (SQDLD), 540-544 (DPYRS), 685-691 (KENSKRW) on structural protein might cross-react with each other. Furthermore, the four epitops were expressed in Escherichia coli. All the four recombinant proteins could react with GPV-antisera and MDPV-antisera in Western blot.
Tipo: Info:eu-repo/semantics/other Palavras-chave: MDPV; GPV; Cross-reactivity; Prediction; Epitope.
Ano: 2013 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822013000200031
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Gene expression profile analysis of human intervertebral disc degeneration Genet. Mol. Biol.
Chen,Kai; Wu,Dajiang; Zhu,Xiaodong; Ni,Haijian; Wei,Xianzhao; Mao,Ningfang; Xie,Yang; Niu,Yunfei; Li,Ming.
In this study, we used microarray analysis to investigate the biogenesis and progression of intervertebral disc degeneration. The gene expression profiles of 37 disc tissue samples obtained from patients with herniated discs and degenerative disc disease collected by the National Cancer Institute Cooperative Tissue Network were analyzed. Differentially expressed genes between more and less degenerated discs were identified by significant analysis of microarray. A total of 555 genes were significantly overexpressed in more degenerated discs with a false discovery rate of < 3%. Functional annotation showed that these genes were significantly associated with membrane-bound vesicles, calcium ion binding and extracellular matrix. Protein-protein interaction...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Genes; Intervertebral disc degeneration; Molecular classification; Protein-protein interaction.
Ano: 2013 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572013000300021
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TaWRKY68 responses to biotic stresses are revealed by the orthologous genes from major cereals Genet. Mol. Biol.
Ding,Bo; Wang,Junbin; Song,Na; Li,Ming; Cheng,Qiaolin; Huang,Guozhong; Guo,Yaolin; Fu,Yang; Xie,Chaojie; Sun,Qixin; Xie,Xiaodong.
WRKY transcription factors have been extensively characterized in the past 20 years, but in wheat, studies onWRKY genes and their function are lagging behind many other species. To explore the function of wheat WRKY genes, we identified a TaWRKY68 gene from a common wheat cultivar. It encodes a protein comprising 313 amino acids which harbors 19 conserved motifs or active sites. Gene expression patterns were determined by analyzing microarray data of TaWRKY68 in wheat and of orthologous genes from maize, rice and barley using Genevestigator. TaWRKY68 orthologs were identified and clustered using DELTA-BLAST and COBALT programs available at NCBI. The results showed that these genes, which are expressed in all tissues tested, had relatively higher levels in...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Wheat; TaWRKY68; Orthologous genes; Genevestigator; Gene functions.
Ano: 2014 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572014000100013
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