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| Brosnahan, Michael L.; Velo-suarez, Lourdes; Ralston, David K.; Fox, Sophia E.; Sehein, Taylor R.; Shalapyonok, Alexi; Sosik, Heidi M.; Olson, Robert J.; Anderson, Donald M.. |
| Transitions between life cycle stages by the harmful dinoflagellate Alexandrium fundyense are critical for the initiation and termination of its blooms. To quantify these transitions in a single population, an Imaging FlowCytobot (IFCB), was deployed in Salt Pond (Eastham, Massachusetts), a small, tidally flushed kettle pond that hosts near annual, localized A. fundyense blooms. Machine-based image classifiers differentiating A. fundyense life cycle stages were developed and results were compared to manually corrected IFCB samples, manual microscopy-based estimates of A. fundyense abundance, previously published data describing prevalence of the parasite Amoebophrya, and a continuous culture of A. fundyense infected with Amoebophrya. In Salt Pond, a... |
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| Ano: 2015 |
URL: http://archimer.ifremer.fr/doc/00296/40737/39741.pdf |
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| Valente, Andre; Sathyendranath, Shubha; Brotas, Vanda; Groom, Steve; Grant, Michael; Taberner, Malcolm; Antoine, David; Arnone, Robert; Balch, William M.; Barker, Kathryn; Barlow, Ray; Belanger, Simon; Berthon, Jean-francois; Besiktepe, Suikru; Borsheim, Yngve; Bracher, Astrid; Brando, Vittorio; Canuti, Elisabetta; Chavez, Francisco; Cianca, Andres; Claustre, Herve; Clementson, Lesley; Crout, Richard; Frouin, Robert; Garcia-soto, Carlos; Gibb, Stuart W.; Gould, Richard; Hooker, Stanford B.; Kahru, Mati; Kampel, Milton; Klein, Holger; Kratzer, Susanne; Kudela, Raphael; Ledesma, Jesus; Loisel, Hubert; Matrai, Patricia; Mckee, David; Mitchell, Brian G.; Moisan, Tiffany; Muller-karger, Frank; O'Dowd, Leonie; Ondrusek, Michael; Platt, Trevor; Poulton, Alex J.; Repecaud, Michel; Schroeder, Thomas; Smythe, Timothy; Smythe-wright, Denise; Sosik, Heidi M.; Twardowski, Michael; Vellucci, Vincenzo; Voss, Kenneth; Werdell, Jeremy; Wernand, Marcel; Wright, Simon; Zibordi, Giuseppe. |
| A global compilation of in situ data is useful to evaluate the quality of ocean-colour satellite data records. Here we describe the data compiled for the validation of the ocean-colour products from the ESA Ocean Colour Climate Change Initiative (OC-CCI). The data were acquired from several sources (including, inter alia, MOBY, BOUSSOLE, AERONET-OC, SeaBASS, NOMAD, MERMAID, AMT, ICES, HOT and GeP&CO) and span the period from 1997 to 2018. Observations of the following variables were compiled: spectral remote-sensing reflectances, concentrations of chlorophyll a, spectral inherent optical properties, spectral diffuse attenuation coefficients and total suspended matter. The data were from multi-project archives acquired via open internet services or from... |
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| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00508/61937/66031.pdf |
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| Valente, Andre; Sathyendranath, Shubha; Brotas, Vanda; Groom, Steve; Grant, Michael; Taberner, Malcolm; Antoine, David; Arnone, Robert; Balch, William M.; Barker, Kathryn; Barlow, Ray; Belanger, Simon; Berthon, Jean-francois; Besiktepe, Sukru; Brando, Vittorio; Canuti, Elisabetta; Chavez, Francisco; Claustre, Herve; Crout, Richard; Frouin, Robert; Garcia-soto, Carlos; Gibb, Stuartw.; Gould, Richard; Hooker, Stanford; Kahru, Mati; Klein, Holger; Kratzer, Susanne; Loisel, Hubert; Mckee, David; Mitchell, Brian G.; Moisan, Tiffany; Muller-karger, Frank; O'Dowd, Leonie; Ondrusek, Michael; Poulton, Alex J.; Repecaud, Michel; Smyth, Timothy; Sosik, Heidi M.; Twardowski, Michael; Voss, Kenneth; Werdell, Jeremy; Wernand, Marcel; Zibordi, Giuseppe. |
| A compiled set of in situ data is important to evaluate the quality of ocean-colour satellite-data records. Here we describe the data compiled for the validation of the ocean-colour products from the ESA Ocean Colour Climate Change Initiative (OC-CCI). The data were acquired from several sources (MOBY, BOUSSOLE, AERONET-OC, SeaBASS, NOMAD, MERMAID, AMT, ICES, HOT, GeP&CO), span between 1997 and 2012, and have a global distribution. Observations of the following variables were compiled: spectral remote-sensing reflectances, concentrations of chlorophyll a, spectral inherent optical properties and spectral diffuse attenuation coefficients. The data were from multi-project archives acquired via the open internet services or from individual projects,... |
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| Ano: 2016 |
URL: https://archimer.ifremer.fr/doc/00346/45674/45298.pdf |
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| Lomnard, Fabien; Boss, Emmanuel; Waite, Anya M.; Vogt, Meike; Uitz, Julia; Stemman, Lars; Sosik, Heidi M.; Schulz, Jan; Romagnan, Jean-baptiste; Picheral, Marc; Pearlman, Jay; Ohman, Mark D; Niehoff, Barbara; Möller, Klas O; Miloslavich, Patricia; Lara-lpez, Ana; Kudela, Raphael; Lopes, Ribens M; Kiko, Rainer; Karp-boss, Lee; Jaffe, Jules S; Iversen, Morten H; Irisson, Jean-olivier; Fennel, Katja; Hauss, Helena; Guidi, Lionel; Gorsky, Gaby; Giering, Sarah L.c.; Gaube, Peter; Gallager, Scott; Dubelaar, George; Cowen, Robert K; Carlotti, François; Briseno-avena, Christian; Berline, Léo; Benoit-bird, Kelly; Bax, Nicholas; Batten, Sonia; Ayata, Sakina Dorothée; Artigas, Luis Felipe; Appeltans, Ward. |
| In this paper we review the technologies available to make globally quantitative observations of particles in general—and plankton in particular—in the world oceans, and for sizes varying from sub-microns to centimeters. Some of these technologies have been available for years while others have only recently emerged. Use of these technologies is critical to improve understanding of the processes that control abundances, distributions and composition of plankton, provide data necessary to constrain and improve ecosystem and biogeochemical models, and forecast changes in marine ecosystems in light of climate change. In this paper we begin by providing the motivation for plankton observations, quantification and diversity qualification on a global scale. We... |
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Palavras-chave: Plankton; Imaging; OceanObs; Autonomous platforms; Global observing; EOVs; ECVs. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00490/60217/63585.pdf |
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| Muelbert, Jose H.; Nidzieko, Nicholas J.; Acosta, Alicia T. R.; Beaulieu, Stace E.; Bernardino, Angelo F.; Boikova, Elmira; Bornman, Thomas G.; Cataletto, Bruno; Deneudt, Klaas; Eliason, Erika; Kraberg, Alexandra; Nakaoka, Masahiro; Pugnetti, Alessandra; Ragueneau, Olivier; Scharfe, Mirco; Soltwedel, Thomas; Sosik, Heidi M.; Stanisci, Angela; Stefanova, Kremena; Stephan, Pierre; Stier, Adrian; Wikner, Johan; Zingone, Adriana. |
| Understanding the threats to global biodiversity and ecosystem services posed by human impacts on coastal and marine environments requires the establishment and maintenance of ecological observatories that integrate the biological, physical, geological, and biogeochemical aspects of ecosystems. This is crucial to provide scientists and stakeholders with the support and knowledge necessary to quantify environmental change and its impact on the sustainable use of the seas and coasts. In this paper, we explore the potential for the coastal and marine components of the International Long-Term Ecological Research Network (ILTER) to fill this need for integrated global observation, and highlight how ecological observations are necessary to address the challenges... |
| Tipo: Text |
Palavras-chave: Climate change; Marine ecosystems; Ecology; EOVs; SWOT; DEIMS. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00615/72756/72025.pdf |
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