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Verkley, G.J.M.; Dukik, K.; Renfurm, R.; Göker, M.; Stielow, J.B.. |
Based on analyses of concatenated internal transcribed spacer regions of the nrDNA operon (ITS), large subunit rDNA (LSU), γ-actin and β-tubulin gene sequences the taxonomy of coniothyrium-like fungi belonging in the family Montagnulaceae, order Pleosporales, was re-assessed. Two new genera are proposed, Alloconiothyrium, to accommodate A. aptrootii sp. nov., and Dendrothyrium for D. longisporum sp. nov. and D. variisporum sp. nov. One new species is described in Paraconiothyrium, viz. Parac. archidendri sp. nov., while two species so far classified in Paraconiothyrium are transferred to Paraphaeosphaeria, viz. Paraph. minitans comb. nov. and Paraph. sporulosa comb. nov. In Paraphaeosphaeria five new species are described based on asexual morphs, viz.... |
Tipo: Article / Letter to the editor |
Palavras-chave: Γ-actin; Β-tubulin; ITS; LSU; Microsphaeropsis; Paraconiothyrium; Taxonomy. |
Ano: 2014 |
URL: http://www.repository.naturalis.nl/record/532399 |
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Crous, P.W.; Wingfield, M.J.; Burgess, , T.I.; Hardy, G.E.St.J.; Barber, P.A.; Alvarado,, P.; Barnes, C.W.; Buchanan, P.K.; Heykoop, M.; Moreno, G.; Vabeikhokhei, J.M.C.; Diepeningen, A.D. van; Hoa, N. van; Tri, M. van; Wiederhold, N.P.; Wrzosek, M.; Zothanzama, J.; Groenewald, J.Z.; Thangavel, R.; Spuy, S. van der; Barili, A.; Barrett, S.; Cacciola, S.O.; Cano-Lira, J.F.; Crane, C.; Decock, C.; Gibertoni, T.B.; Guarro, J.; Guevara-Suarez, M.; Hubka, V.; Kolarík, M.; Lira, C.R.S.; Ordoñez, M.E.; Padamsee, M.; Ryvarden, L.; Soares, A.M.; Stchigel, A.M.; Sutton, D.A.; Vizzini, A.; Weir, B.S.; Acharya, K.; Aloi, F.; Baseia, I.G.; Blanchette, R.A.; Bordallo, J.J.; Bratek, Z.; Butler, T.; Cano-Canals, J.; Carlavilla, J.R.; Chander, J.; Cheewangkoon, R.; Cruz, R.H.S.F.; Silva, M. da; Dutta, A.K.; Ercole, E.; Escobio, V.; Esteve-Raventós, F.; Flores, F.A.; Gené, J.; Góis, J.S.; Haines, L.; Held, B.W.; Horta Jung, M.; Hosaka, K.; Jung, J.; Jurjević, Ž.; Kautman, V.; Kautmanova, I.; Kiyashko, A.A.; Kozanek, M.; Kubátová, A.; Lafourcade, M.; Spada, F. La; Latha, K.P.D.; Madrid, H.; Malysheva, E.F.; Manimohan, P.; Manjón, J.L.; Martín, M.P.; Mata, M.; Merényi, Z.; Morte, A.; Nagy, I.; Normand, A.-C.; Paloi, S.; Pattison, N.; Pawłowska, J.; Pereira, O.L.; Petterson, M.E.; Picillo, B.; Raj, K.N.A.; Roberts, A.; Rodríguez, A.; Rodríguez-Campo, F.J.; Romański, M.; Ruszkiewicz-Michalska, M.; Scanu, B.; Schena, L.; Semelbauer, M.; Sharma, R.; Shouche, Y.S.; Silva, V.; Staniaszek-Kik, M.; Stielow, J.B.; Tapia, C.; Taylor, P.W.J.; Toome-Heller, M.. |
Novel species of fungi described in this study include those from various countries as follows: Australia: Banksiophoma australiensis (incl. Banksiophoma gen. nov.) on Banksia coccinea, Davidiellomyces australiensis (incl. Davidiellomyces gen. nov.) on Cyperaceae, Didymocyrtis banksiae on Banksia sessilis var. cygnorum, Disculoides calophyllae on Corymbia calophylla, Harknessia banksiae on Banksia sessilis, Harknessia banksiae-repens on Banksia repens, Harknessia banksiigena on Banksia sessilis var. cygnorum, Harknessia communis on Podocarpus sp., Harknessia platyphyllae on Eucalyptus platyphylla, Myrtacremonium eucalypti (incl. Myrtacremonium gen. nov.) on Eucalyptus globulus, Myrtapenidiella balenae on Eucalyptus sp., Myrtapenidiella eucalyptigena on... |
Tipo: Article / Letter to the editor |
Palavras-chave: ITS nrDNA barcodes; LSU; Novel fungal species; Systematics. |
Ano: 2017 |
URL: http://www.repository.naturalis.nl/record/631070 |
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Stielow, J.B.; Lévesque, C.A.; Seifert, K.A.; Meyer, W.; Irinyi, L.; Smits, D.; Renfurm, R.; Verkley, G.J.M.; Groenewald, M.; Chaduli, D.; Lomascolo, A.; Welti, S.; Lesage-Meessen, L.; Favel, A.; Al-Hatmi, A.M.S.; Damm, U.; Yilmaz, N.; Houbraken, J.; Lombard, L.; Quaedvlieg, W.; Binder, M.; Vaas, L.A.I.; Vu, D.; Yurkov, A.; Begerow, D.; Roehl, O.; Guerreiro, M.; Fonseca, A.; Samerpitak, K.; Diepeningen, A.D. van; Dolatabadi, S.; Moreno, L.F.; Casaregola, S.; Mallet, S.; Jacques, N.; Roscini, L.; Egidi, E.; Bizet, C.; Garcia-Hermoso, D.; Martin, M.P.; Deng, S.; Groenewald, J.Z.; Boekhout, T.; Beer, Z.W. de; Barnes, I.; Duong, T.A.; Wingfield, M.J.; Hoog, G.S. de; Crous, P.W.; Lewis, C.T.; Hambleton, S.; Moussa, T.A.A.; Al-Zahrani, H.S.; Almaghrabi, O.A.; Louis-Seize, G.; Assabgui, R.; McCormick, W.; Omer, G.; Dukik, K.; Cardinali, G.; Eberhardt, U.; Vries, M. de; Robert, V.. |
The aim of this study was to assess potential candidate gene regions and corresponding universal primer pairs as secondary DNA barcodes for the fungal kingdom, additional to ITS rDNA as primary barcode. Amplification efficiencies of 14 (partially) universal primer pairs targeting eight genetic markers were tested across > 1 500 species (1 931 strains or specimens) and the outcomes of almost twenty thousand (19 577) polymerase chain reactions were evaluated. We tested several well-known primer pairs that amplify: i) sections of the nuclear ribosomal RNA gene large subunit (D1–D2 domains of 26/28S); ii) the complete internal transcribed spacer region (ITS1/2); iii) partial β-tubulin II (TUB2); iv) γ-actin (ACT); v) translation elongation factor 1-α (TEF1α);... |
Tipo: Article / Letter to the editor |
Palavras-chave: DNA barcoding; ITS supplement; Molecular taxonomy; Phylogeny; Species identification; Universal primers. |
Ano: 2015 |
URL: http://www.repository.naturalis.nl/record/588731 |
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