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The genome sequence of Dyella jiangningensis FCAV SCS01 from a lignocellulose-decomposing microbial consortium metagenome reveals potential for biotechnological applications Genet. Mol. Biol.
Desiderato,Joana G.; Alvarenga,Danillo O.; Constancio,Milena T.L.; Alves,Lucia M.C.; Varani,Alessandro M..
Abstract Cellulose and its associated polymers are structural components of the plant cell wall, constituting one of the major sources of carbon and energy in nature. The carbon cycle is dependent on cellulose- and lignin-decomposing microbial communities and their enzymatic systems acting as consortia. These microbial consortia are under constant exploration for their potential biotechnological use. Herein, we describe the characterization of the genome of Dyella jiangningensis FCAV SCS01, recovered from the metagenome of a lignocellulose-degrading microbial consortium, which was isolated from a sugarcane crop soil under mechanical harvesting and covered by decomposing straw. The 4.7 Mbp genome encodes 4,194 proteins, including 36 glycoside hydrolases...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Plant cell wall polysaccharides; Glycoside hydrolases; Genome annotation; Comparative genomics; Rhodanobacteraceae.
Ano: 2018 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000300507
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Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388T Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents ArchiMer
Allioux, Maxime; Yvenou, Steven; Slobodkina, Galina; Slobodkin, Alexander; Shao, Zongze; Jebbar, Mohamed; Alain, Karine.
Marine hydrothermal systems are characterized by a pronounced biogeochemical sulfur cycle with the participation of sulfur-oxidizing, sulfate-reducing and sulfur-disproportionating microorganisms. The diversity and metabolism of sulfur disproportionators are studied to a much lesser extent compared with other microbial groups. Dissulfurirhabdus thermomarina SH388T is an anaerobic thermophilic bacterium isolated from a shallow sea hydrothermal vent. D. thermomarina is an obligate chemolithoautotroph able to grow by the disproportionation of sulfite and elemental sulfur. Here, we present the results of the sequencing and analysis of the high-quality draft genome of strain SH388T. The genome consists of a one circular chromosome of 2,461,642 base pairs, has a...
Tipo: Text Palavras-chave: Genome annotation; Dissulfurirhabdus; Shallow sea hydrothermal vents; Inorganic sulfur compound disproportionation.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00651/76270/77245.pdf
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Exploring biochemical diversity in bacteria Anais da ABC (AABC)
WEISSENBACH,JEAN.
Abstract Abstract: The various descriptors of biochemical diversity and an evaluation of its status of knowledge are briefly outlined. Using a few examples from in house research projects, I illustrate strategies used to increase this knowledge. Because bacteria represent an extremely diverse domain of life and carry out the widest known range of biochemical transformations, this mini-review focusses on bacteria.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Bacterial metabolism; Biochemical function; Enzyme discovery; Genome annotation; Bioremediation.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652019000600605
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