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Registros recuperados: 67
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Detección de variantes alélicas de la kappa-caseína en bovinos Hartón del Valle Acta Agron. (Palmira)
Naranjo,,Julián; Posso,Andrés; Cárdenas,Heiber; Muñoz F,Jaime E..
RESUMEN Se utilizó ADN de 2 machos y 34 hembras de la raza de ganado criollo Hartón del Valle para detectar polimorfismos en el gen que codifica para la kappa-caseína (κ-CN) mediante PCR-RFLP (reacción en cadena de la polimerasa-polimorfismo en la longitud de los fragmentos de restricción) y PCR-SSCP (reacción en cadena de la polimerasa-polimorfismo en la conformacion de ADN de cadena única). Se identificaron 17 individuos homocigotos AA, 15 heterocigotos AB y 4 homocigotos BB. La identificación de machos jóvenes portadores del genotipo de interés en menos de ocho horas mediante SSCP representa una ventaja para los propietarios de hatos abriendo la posibilidad de aumentar la frecuencia del alelo B, una de las vías para mejorar la eficiencia lechera para la...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Bos taurus; Kappa-caseína; PCR-SSCP; PCR-RFLP.
Ano: 2007 URL: http://www.scielo.org.co/scielo.php?script=sci_arttext&pid=S0120-28122007000100043
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Investigação do gene p53 de frangos expostos às aflatoxinas Arq. Bras. Med. Vet. Zootec.
Cruz,A.C.F.G.; Madruga,C.R.M.; Mallmann,C.A.; Moreira,E.L.T.; Botura,M.B.B.; Silva,G.D.S.; Batatinha,M.J.M..
Identificou-se o efeito das aflatoxinas (AFs) sobre o gene p53 de frangos de corte, de linhagem comercial, separados em: grupo experimental, tratado (GT) com ração comercial contendo 2,8ppm de AFs totais durante 21 dias consecutivos, e grupo-controle (GC), sem exposição às AFs. Macroscopicamente, as alterações caracterizaram-se por hepatomegalia e aspecto pálido-amarelado com alguns focos hemorrágicos e, histologicamente, por desarranjo trabecular, pleomorfismo hepatocítico com cariomegalia, degeneração vacuolar intracitoplasmática, necrose com infiltração linfocítica e hiperplasia de ductos biliares. A PCR com os primers GSPT53c-1 com base no gene candidato a p53 (GenBank XM_424937.2) gerou um produto de aproximadamente 350 pares de base. O amplicon...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Frango de corte; Aflatoxinas; Gene p53; PCR-RFLP.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-09352012000600036
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Associação do loco BoLA-DRB3.2 com produção de leite em bovinos da raça Gir Arq. Bras. Med. Vet. Zootec.
Machado,M.A.; Nascimento,C.S.; Martinez,M.L.; Silva,M.V.G.B.; Campos,A.L.; Teodoro,R.L.; Verneque,R.S.; Guimarães,S.E.F..
A associação entre os alelos do loco BoLA-DRB3.2, identificados pela técnica de PCR-RFLP, e a produção de leite na raça Gir foi estudada por meio da análise de dados moleculares e fenotípicos de 424 vacas Gir, utilizando um modelo misto, sob modelo animal. Os dados moleculares consistiam dos genótipos dos animais para os alelos do loco BoLA-DRB3.2 e os dados fenotípicos eram referentes à produção de leite em até 305 dias de lactação. O loco é altamente polimórfico nesta raça, sendo identificados sete alelos (BoLA-DRB3.2*4, *8, *11, *19, *28, *41 e *48) que não haviam sido encontrados em animais zebuínos. Dois alelos (*16 e *29) estavam significativamente associados com maiores produções de leite, sugerindo que o próprio loco BoLA-DRB3.2 ou um QTL a ele...
Tipo: Info:eu-repo/semantics/article Palavras-chave: BoLA-DRB3; PCR-RFLP; Gene candidato; Bovinos; Gir.
Ano: 2005 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-09352005000300017
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PCR-RFLP assay as an option for primary HPV test BJMBR
Golfetto,L.; Alves,E.V.; Martins,T.R.; Sincero,T.C.M.; Castro,J.B.S.; Dannebrock,C.; Oliveira,J.G.; Levi,J.E.; Onofre,A.S.C.; Bazzo,M.L..
Persistent human papillomavirus (HPV) infection is an essential factor of cervical cancer. This study evaluated the analytical performance of restriction fragment length polymorphism polymerase chain reaction (PCR-RFLP) assay compared to PapilloCheck® microarray to identify human papilloma virus (HPV) in cervical cells. Three hundred and twenty-five women were analyzed. One sample was used for conventional cytology and another sample was collected using BD SurePath™ kit for HPV tests. Eighty samples (24.6%) were positive for HPV gene by PCR-Multiplex and were then submitted to PCR-RFLP and PapilloCheck® microarray. There was a genotyping agreement in 71.25% (57/80) on at least one HPV type between PCR-RFLP and PapilloCheck® microarray. In 22 samples...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Cervical cancer; HPV; Screening; PCR-RFLP; PapilloCheck® microarray.
Ano: 2018 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2018000500619
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Molecular characterization of enteroinvasive Escherichia coli ipa genes by PCR-RFLP analysis BJM
Gibotti,Adriana; Tanaka,Tânia L.; Oliveira,Valéria R.; Taddei,Carla R.; Martinez,Marina B..
In this study, polymorphism in ipa genes was found in five out of nine EIEC serotypes studied. When SalI and HindII were used in RFLP-PCR assays many EIEC serotypes showed polymorphism in ipaB and ipaD. On the other hand, no polymorphism was observed in ipaA and ipaC in these strains. The polymorphism present in EIEC strains is serotype-dependent, since restriction patterns were conserved amongst strains belonging to the same serotype. When IpaB deduced amino acid sequences of S. flexneri M90T and FBC124-13 were compared, ten amino acids changes could be observed mainly in the amino-terminal region. The deduced EIEC IpaD amino-acid sequence presented 91% similarity with the Shigella strain. In this case, amino acid changes were spread out through the whole...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Ipa; Enteroinvasive Escherichia coli; Polymorphism; PCR-RFLP.
Ano: 2004 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822004000100012
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Characterization of cry2-type genes of Bacillus thuringiensis strains from soil-isolated of Sichuan basin, China BJM
Liang,Hongxia; Liu,Yao; Zhu,Jun; Guan,Peng; Li,Shuangcheng; Wang,Shiquan; Zheng,Aiping; Liu,Huainian; Li,Ping.
Sichuan basin, situated in the west of China, is the fourth biggest basin in China. In order to describe a systematic study of the cry2-type genes resources from Bacillus thuringiensis strains of Sichuan basin, a total of 791 Bacillus thuringiensis strains have been screened from 2650 soil samples in different ecological regions. The method of PCR-restriction fragment length polymorphism (PCR-RFLP) was used to identify the type of cry2 genes. The results showed that 322 Bacillus thuringiensis strains harbored cry2-type genes and four different RFLP patterns were found. The combination of cry2Aa/cry2Ab genes was the most frequent (90.4%), followed by cry2Aa (6.8%) and cry2Ab alone (2.5%), and only one novel type of cry2 gene was cloned from one isolate...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Bacillus thuringiensis; PCR-RFLP; SDS-PAGE; Novel cry2-type gene.
Ano: 2011 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000100018
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16S rRNA region based PCR protocol for identification and subtyping of Parvimonas micra BJM
Ota-Tsuzuki,C.; Brunheira,A.T.P.; Mayer,M.P.A..
The present study established a PCR protocol in order to identify Parvimonas micra and to evaluate the intra-species diversity by PCR-RFLP of 16S rRNA partial sequence. The data indicated that the protocol was able to identify this species which could be clustered in five genotypes.
Tipo: Info:eu-repo/semantics/article Palavras-chave: PCR-RFLP; 16S rRNA; Anaerobic cocci.
Ano: 2008 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822008000400001
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Rapid detection of Candida species in bronchoalveolar lavage fluid from patients with pulmonary symptoms BJM
Zarrinfar,Hossein; Kaboli,Saeed; Dolatabadi,Somayeh; Mohammadi,Rasoul.
Abstract Candida species, especially C. albicans, are commensals on human mucosal surfaces, but are increasingly becoming one of the important invasive pathogens as seen by a rise in its prevalence in immunocompromised patients and in antibiotic consumption. Thus, an accurate identification of Candida species in patients with pulmonary symptoms can provide important information for effective treatment. A total of 75 clinical isolates of Candida species were obtained from the bronchoalveolar lavage fluid of both immunocompromised and immunocompetent patients with pulmonary symptoms. Candida cultures were identified based on nuclear ribosomal Internal Transcribed Spacer (ITS1-ITS2 rDNA) sequence analysis by polymerase chain reaction–restriction fragment...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Candida; Pulmonary; PCR-RFLP.
Ano: 2016 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822016000100172
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Use of pcr-rflp of thefla a gene for detection and subtyping of Campylobacter jejuni strains Potentially related to Guillain-barré syndrome, isolated from humans and animals BJM
Scarcelli,E.; Piatti,R.M.; Harakava,R.; Miyashiro,S.; Campos,F.R.; Souza,M.C.A.; Cardoso,M.V.; Teixeira,S.R.; Genovez,M.E..
The objectives of the present study were the subtyping of Campylobacter jejuni subsp. jejuni strains obtained from humans and different animal species using PCR-RFLP, and the detection, by means of the same technique, of strains related to serotype PEN O19:LIO 7, the main C. jejuni serotype linked to Guillain-Barré Syndrome (GBS). Seventy C. jejuni strains isolated from human feces (n=33), primates (n=15), dogs (n=5), swine (n=2), bovines (n=1), abortion material from goats (n=2) and poultry carcasses (n=12), all collected in the state of São Paulo, were subtyped by means of PCR-RFLP of fla A gene, using restriction endonucleases Hae III, Afa I and Mbo I. Seven subtypes were observed when using the enzyme Hae III; eight when using Mbo I; and seven when...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Campylobacter jejuni; PCR-RFLP; Subtyping; Guillain-Barré Syndrome.
Ano: 2009 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822009000400029
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Prevalence of Helicobacter pylori in children in eastern Turkey and molecular typing of isolates BJM
Ozbey,Gokben; Dogan,Yasar; Demiroren,Kaan; Ozercan,Ibrahim Hanifi.
The objectives of the present study were to determine Helicobacter pylori via culture, polymerase chain reaction and histopathological diagnosis in 101 children ranging in age from 4 to 18 years, to identify the association among restriction fragment length polymorphism types and clinical disease and to investigate the relationships among different isolates of H. pylori in different age groups. We observed a high prevalence of H. pylori infections in children between the ages of 13 and 18 (75.8%), while children aged 4 to 6 years had the lowest prevalence of infection (40%). H. pylori was detected in 30.7% (31 of 101), 66.3% (67 of 101) and 63.2% (60 of 95) of children as determined by culture methods, PCR and histological examination, respectively. H....
Tipo: Info:eu-repo/semantics/article Palavras-chave: Children; Culture; Helicobacter pylori; PCR-RFLP.
Ano: 2015 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000200505
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Genetic Relationships of Common Bean (Phaseolus vulgaris L.) Race Chile with Wild Andean and Mesoamerican Germplasm Chilean J. Agric. Res.
Becerra V,Viviana; Paredes C,Mario; Debouck,Daniel.
The Chilean common bean (Phaseolus vulgaris L.) belongs to the cultivated race Chile and its origin is presumably Andean. The objective of this study was to identify the origin of a group of Chilean accessions based on their genetic relationship with wild material from the Mesoamerican and Andean common bean gene pool. To achieve this objective, universal primers of chloroplast DNA (cpDNA) and mitochondrial DNA (mtDNA) were used to detect polymorphism using Polymerase Chain Reaction - Restriction Fragment Length Polymorphism (PCR-RFLP). Thirty-two genotypes were analyzed, including wild material from Mexico, Ecuador, Peru, Bolivia, and Argentina, as well as Chilean cultivated genotypes belonging to endemic Chilean accession types (Tórtola, Coscorrón, and...
Tipo: Journal article Palavras-chave: Chilean common bean germplasm; Chloroplast DNA; Mitochondrial DNA; PCR-RFLP.
Ano: 2011 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0718-58392011000100001
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Caracterização da região espaçadora 16-23S rDNA para diferenciação de estirpes de rizóbios utilizadas na produção de inoculantes comerciais no Brasil Ciência Rural
Oliveira,Andréia Mara Rotta; Bangel,Eliane Villamil; Hungria,Mariangela; Silveira,José Ricardo Pfeifer; Vargas,Luciano Kayser; Lisboa,Bruno Brito.
A identificação de estirpes de rizóbio tem sido feita pela especificidade por hospedeiros e ensaios microbiológicos tradicionais. Por constituírem um grupo filogeneticamente heterogêneo, diferentes técnicas moleculares têm sido empregadas para auxiliar na caracterização genética e na identificação de estirpes eficientes e competitivas para a produção de inoculantes. Este trabalho teve por objetivos caracterizar a região espaçadora 16S-23S rDNA das estirpes de rizóbios utilizadas nos inoculantes comercializados no Brasil para espécies leguminosas, utilizando a técnica da PCR em combinação com a de RFLP, e avaliar a possibilidade do uso desse marcador molecular como método auxiliar para identificação das estipes. A amplificação da região espaçadora 16-23 S...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Qualidade de inoculantes; PCR-RFLP; Marcadores moleculares.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782012000800015
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Estandarización de técnicas de extracción de ADN en sementales porcinos para evaluar la frecuencia de los genes ESR y PLRL con PCR-RFLP Colegio de Postgraduados
Dolores Ramos Eva.
Con el objeto de estandarizar y perfeccionar una técnica de extracción y purificación de ADN a partir de sangre, semen y pelo de porcinos, se obtuvieron muestras de 35 sementales de línea materna Yorkshire y Landrace, en los cuales se valoró la frecuencia de los genes ESR y PRLR mediante PCR-RFLP. La extracción de ADN a partir de sangre y semen únicamente se estandarizaron. El pelo de sementales fue la mejor opción para obtener una alta cantidad y calidad de ADN. Se identificó la frecuencia de dos genes relacionados con prolificidad: Receptor de Prolactina (PRLR) y Receptor de Estrógeno (ESR); en su amplificación se utilizó PCR-RFLP´s y se identificaron los genotipos. En esta identificación se utilizó la enzima Alu I para PRLR y Pvu II para...
Palavras-chave: ADN; Pelo; Sangre; Semen; Cerdos; PCR-RFLP hair; Blood and semen DNA; Boars; PCR-RFLP.
Ano: 2012 URL: http://hdl.handle.net/10521/888
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Estandarización de técnicas de extracción de ADN en sementales porcinos para evaluar la frecuencia de los genes ESR y PLRL con PCR-RFLP Colegio de Postgraduados
Dolores Ramos Eva.
Con el objeto de estandarizar y perfeccionar una técnica de extracción y purificación de ADN a partir de sangre, semen y pelo de porcinos, se obtuvieron muestras de 35 sementales de línea materna Yorkshire y Landrace, en los cuales se valoró la frecuencia de los genes ESR y PRLR mediante PCR-RFLP. La extracción de ADN a partir de sangre y semen únicamente se estandarizaron. El pelo de sementales fue la mejor opción para obtener una alta cantidad y calidad de ADN. Se identificó la frecuencia de dos genes relacionados con prolificidad: Receptor de Prolactina (PRLR) y Receptor de Estrógeno (ESR); en su amplificación se utilizó PCR-RFLP´s y se identificaron los genotipos. En esta identificación se utilizó la enzima Alu I para PRLR y Pvu II para...
Palavras-chave: ADN; Pelo; Sangre; Semen; Cerdos; PCR-RFLP hair; Blood and semen DNA; Boars; PCR-RFLP.
Ano: 2012 URL: http://hdl.handle.net/10521/911
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Estandarización de técnicas de extracción de ADN en sementales porcinos para evaluar la frecuencia de los genes ESR y PLRL con PCR-RFLP Colegio de Postgraduados
Dolores Ramos Eva.
Con el objeto de estandarizar y perfeccionar una técnica de extracción y purificación de ADN a partir de sangre, semen y pelo de porcinos, se obtuvieron muestras de 35 sementales de línea materna Yorkshire y Landrace, en los cuales se valoró la frecuencia de los genes ESR y PRLR mediante PCR-RFLP. La extracción de ADN a partir de sangre y semen únicamente se estandarizaron. El pelo de sementales fue la mejor opción para obtener una alta cantidad y calidad de ADN. Se identificó la frecuencia de dos genes relacionados con prolificidad: Receptor de Prolactina (PRLR) y Receptor de Estrógeno (ESR); en su amplificación se utilizó PCR-RFLP´s y se identificaron los genotipos. En esta identificación se utilizó la enzima Alu I para PRLR y Pvu II para...
Tipo: Tesis Palavras-chave: ADN; Pelo; Sangre; Semen; Cerdos; PCR-RFLP; Hair; Blood and semen DNA; Boars.
Ano: 2007 URL: http://hdl.handle.net/10521/1202
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Identificación molecular de heces y análisis de hábitos alimenticios de carnívoros en la reserva de la biósfera "Sierra del Abra Tanchipa", San Luis Potosí, México. Colegio de Postgraduados
Benítez Alemán, Héctor Eduardo.
La identificación precisa de heces de carnívoros silvestres es importante para describir sus hábitos alimenticios, sobre todo en aquellas especies elusivas o en riesgo. Sin embargo Identificar las heces de especies de carnívoros simpátricos no es una tarea sencilla. Por ello, las técnicas moleculares, son herramientas que brindan mayor precisión en la identificación de heces. El análisis de hábitos alimenticios aporta información valiosa para entender la estructura poblacional de los depredadores y sus presas, así como su importancia ecológica para generar estrategias de manejo y conservación de carnívoros y sus presas. Los objetivos de este estudio fueron identificar las heces de carnívoros extrayendo ADN mitocondrial de estas y amplificando un fragmento...
Palavras-chave: ADN mitocrondrial; Citocromo b; PCR-RFLP; Hábitos alimenticios; Carnívoros; Mitochondrial DNA; Cytochrome b; Food habits; Carnivores; Ganadería; Maestría.
Ano: 2014 URL: http://hdl.handle.net/10521/2291
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Expression profiles and polymorphism analysis of CDIPT gene on Qinchuan cattle Electron. J. Biotechnol.
Fu,Changzhen; Wang,Hong; Li,Yaokun; Wang,Jiali; Cheng,Gong; Wang,Hongbao; Yang,Wucai; Zan,Linsen.
Background CDIPT (CDP-diacylglycerol-inositol 3-phosphatidyltransferase, EC 2.7.8.11) was found on the cytoplasmic side of the Golgi apparatus and the endoplasmic reticulum. It was an integral membrane protein performing the last step in the de novo biosynthesis of phosphatidylinositol (PtdIns). In recent years, PtdIns has been considered to play an essential role in energy metabolism, fatty acid metabolic pathway and intracellular signal transduction in eukaryotic cells. Results In this study, the results of real-time polymerase chain reaction (PCR) showed that the expression of CDIPT gene was remarkably different in diverse tissues. We also detected the polymorphism of bovine CDIPT gene and analyzed its association with body measurement and meat quality...
Tipo: Journal article Palavras-chave: Body measurement traits; Gene expression; Meat quality traits; PCR-RFLP; SNP.
Ano: 2014 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582014000400004
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A C1069G SNP of the MC4R gene and its association with economic traits in Korean native cattle (brown, brindle, and black) Electron. J. Biotechnol.
Lee,Youngsub; Park,Sairom; Kim,Hun; Lee,Seung Kyu; Kim,Jin Woo; Lee,Hak Kyo; Jeong,Dong Kee; Lee,Sung Jin.
Background: The melanocortin-4 receptor gene (MC4R) plays an important role in regulating food intake and body weight in mammals. In the present study, we identified the MC4R gene in native Korean brown, brindle, and black cattle by polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP), and investigated its association with economic traits. A total of 413 cattle from the three breeds were tested for backfat thickness, carcass weight, longissimus muscle area, and marbling score, and statistical data were analyzed using the SAS program. Results: The C allele had the highest frequency in brown and brindle cattle, and the G allele frequency was highest in black cattle. The C1069G SNP was significantly (p < 0.05) associated with only...
Tipo: Journal article Palavras-chave: Economic trait; Marbling scores; MC4R gene; PCR-RFLP; SNP.
Ano: 2013 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582013000500014
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Polymorphisms of the bovine chemokine receptor-like 1 gene and their associations with meat quality traits in Qinchuan cattle (Bos taurus) Electron. J. Biotechnol.
Zhan,Xiaoli; Jiang,Bijie; Ma,Xianghui; Fu,Changzhen; Zan,Linsen.
Background: We investigated the polymorphisms of the bovine chemokine receptor-like 1(CMKLR1) gene. The coding region of CMKLR1 was screened in Qinchuan cattle by PCR-RFLP technology. Results: In this study, we discovered two single nucleotide polymorphisms (SNPs) (264G > C and 762C > T) in the coding region of the CMKLR1 gene. Hence, we described the BmgT120l and Pdm1 PCR-RFLP methods for detecting the 64G > C and 762C > T mutations, respectively. PCR-RFLP and sequencing were used to analyze the two loci of CMKLR1 gene in 324 individuals, which were randomly selected from breeding populations. Furthermore, meat quality traits in another 80 Qinchuan individuals were analyzed by the comparison between the genotypes and their phenotypic data....
Tipo: Journal article Palavras-chave: CMKLR1 gene; Meat quality traits; PCR-RFLP; Qinchuan cattle; SNP.
Ano: 2013 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582013000100003
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Genetic polymorphism of the &#945;s1-casein locus in five populations of goats from Mexico Electron. J. Biotechnol.
Torres-Vázquez,José Antonio; Vázquez Flores,Felícitas; Montaldo,Hugo H; Ulloa-Arvizu,Raúl; Valencia Posadas,Mauricio; Gayosso Vázquez,Amanda; Alonso Morales,Rogelio Alejandro.
With the objective of estimating allele frequencies, and testing for population divergence for the CSN1S1 locus, genotypes of animals from five goat populations; Saanen (n = 97), Alpine (n = 81) Toggenburg (n = 92), local goats with external appearance similar to the Murciana-Granadina breed from Central Mexico (n = 26) and heterogeneous local animals denominated Mosaico Lagunero (n = 30), from Northern Mexico, were identified using PCR and Xmn1 PCR-RFLP methodology. For Saanen, Alpine and Toggenburg, the sum of E and F alleles had the largest frequencies (from 0.468 to 0.789), while for the groups local Murciana-Granadina and Mosaico Lagunero the sum of the most frequent allelic groups (A* and B*), were 0.385 and 0.533 respectively. Both local...
Tipo: Journal article Palavras-chave: CSN1S1; Gene frequencies; Genetic diversity; Goat milk; PCR-RFLP.
Ano: 2008 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582008000300007
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