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Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments ArchiMer
Jeanbille, Mathilde; Gury, Jérôme; Duran, Robert; Tronczynski, Jacek; Ghiglione, Jean-françois; Agogué, Hélène; Saïd, Olfa Ben; Taïb, Najwa; Debroas, Didier; Garnier, Cédric; Auguet, Jean-christophe.
Benthic microorganisms are key players in the recycling of organic matter and recalcitrant compounds such as polyaromatic hydrocarbons (PAHs) in coastal sediments. Despite their ecological importance, the response of microbial communities to chronic PAH pollution, one of the major threats to coastal ecosystems, has received very little attention. In one of the largest surveys performed so far on coastal sediments, the diversity and composition of microbial communities inhabiting both chronically contaminated and non-contaminated coastal sediments were investigated using high-throughput sequencing on the 18S and 16S rRNA genes. Prokaryotic alpha-diversity showed significant association with salinity, temperature, and organic carbon content. The effect of...
Tipo: Text Palavras-chave: Microbial communities; PAH; Chronic contamination; Coastal sediment; Functional diversity.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00347/45854/45522.pdf
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Dynamics of particulate organic matter composition in coastal systems: forcing of spatio-temporal variability at multi-systems scale ArchiMer
Lienart, Camilla; Savoye, Nicolas; David, Valerie; Ramond, Pierre; Tress, Paco Rodriguez; Hanquiez, Vincent; Marieu, Vincent; Aubert, Fabien; Aubin, Sebastien; Bichon, Sabrina; Boinet, Christophe; Bourasseau, Line; Bozec, Yann; Breret, Martine; Breton, Elsa; Caparros, Jocelyne; Cariou, Thierry; Claquin, Pascal; Conan, Pascal; Corre, Anne-marie; Costes, Laurence; Crouvoisier, Muriel; Del Amo, Yolanda; Derriennic, Herve; Dindinaud, Francois; Duran, Robert; Durozier, Maia; Devesa, Jeremy; Ferreira, Sophie; Feunteun, Eric; Garcia, Nicole; Geslin, Sandrine; Grossteffan, Emilie; Gueux, Aurore; Guillaudeau, Julien; Guillou, Gael; Jolly, Orianne; Lachaussee, Nicolas; Lafont, Michel; Lagadec, Veronique; Lamoureux, Jezabel; Lauga, Beatrice; Lebreton, Benoit; Lecuyer, Eric; Lehodey, Jean-paul; Leroux, Cedric; L'Helguen, Stephane; Mace, Eric; Maria, Eric; Mousseau, Laure; Nowaczyk, Antoine; Pineau, Philippe; Petit, Franck; Pujo-pay, Mireille; Raimbault, Patrick; Rimmelin-maury, Peggy; Rouaud, Vanessa; Sauriau, Pierre-guy; Sultan, Emmanuelle; Susperregui, Nicolas.
In costal systems, particulate organic matter (POM) results from a multiplicity of sources having their respective dynamics in terms of production, decomposition, transport and burial. The POM pool experiences thus considerable spatial and temporal variability. In order to better understand this variability, the present study employs statistical multivariate analyses to investigate links between POM composition and environmental forcings for a panel of twelve coastal systems distributed along the three maritime regions of France and monitored weekly to monthly for 1 to 8 years. At multi-system scale, two main gradients of POC composition have been identified: a ‘Continent-Ocean’ gradient associated with hydrodynamics, sedimentary dynamics and depth of the...
Tipo: Text Palavras-chave: Particulate organic matter; Coastal systems; Environmental forcing; Meta-analysis; France.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00433/54471/55848.pdf
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Response of Core Microbial Consortia to Chronic Hydrocarbon Contaminations in Coastal Sediment Habitats ArchiMer
Jeanbille, Mathilde; Gury, Jerome; Duran, Robert; Tronczynski, Jacek; Agogue, Helene; Ben Said, Olfa; Ghiglione, Jean-francois; Auguet, Jean-christophe.
Traditionally, microbial surveys investigating the effect of chronic anthropogenic pressure such as polyaromatic hydrocarbons (PAHs) contaminations consider just the alpha and beta diversity and ignore the interactions among the different taxa forming the microbial community. Here, we investigated the ecological relationships between the three domains of life (i.e., Bacteria, Archaea, and Eukarya) using 454 pyrosequencing on the 16S rRNA and 18S rRNA genes from chronically impacted and pristine sediments, along the coasts of the Mediterranean Sea (Gulf of Lion, Vermillion coast, Corsica, Bizerte lagoon and Lebanon) and the French Atlantic Ocean (Bay of Biscay and English Channel). Our approach provided a robust ecological framework for the partition of the...
Tipo: Text Palavras-chave: Co-occurrence network; Core community; Microbial consortia; PAH; Chronic contamination; Coastal sediment.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00355/46586/46394.pdf
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