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Registros recuperados: 11
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A three-dimensional view on biodiversity changes: spatial, temporal, and functional perspectives on fish communities in the Baltic Sea ArchiMer
Frelat, Romain; Orio, Alessandro; Casini, Michele; Lehmann, Andreas; Merigot, Bastien; Otto, Saskia A.; Sguotti, Camilla; Moellmann, Christian.
Fisheries and marine ecosystem-based management requires a holistic understanding of the dynamics of fish communities and their responses to changes in environmental conditions. Environmental conditions can simultaneously shape the spatial distribution and the temporal dynamics of a population, which together can trigger changes in the functional structure of communities. Here, we developed a comprehensive framework based on complementary multivariate statistical methodologies to simultaneously investigate the effects of environmental conditions on the spatial, temporal and functional dynamics of species assemblages. The framework is tested using survey data collected during more than 4000 fisheries hauls over the Baltic Sea between 2001 and 2016. The...
Tipo: Text Palavras-chave: Baltic Sea; Demersal fish community; Functional traits; Multivariate analysis; Spatio-temporal dynamics; Species distribution.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00475/58659/62410.pdf
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Environmental drivers explain regional variation of changes in fish and invertebrate functional groups across the Mediterranean Sea from 1994 to 2012 ArchiMer
Brind'Amour, Anik; Rochet, Marie-joelle; Ordines, Francesc; Hosack, Geoff; Berthele, Olivier; Merigot, Bastien; Carbonara, Pierluigi; Follesa, Maria Cristina; Jadaud, Angelique; Lefkaditou, Evgenia; Maiorano, Porzia; Peristeraki, Panagiota; Mannini, Alessandro; Rabiller, Manuella; Spedicato, Maria Teresa; Tserpes, George; Trenkel, Verena.
Functional groups are sets of species that play a similar role in a food web. We defined functional groups of fish species based on their morphological characteristics, while using expert knowledge for invertebrates. We measured 9 morphological traits of 72 fish species, and carried out multivariate analyses to assign fish species to functional groups. The analysis identified 9 trait-based fish functional groups to which were added 3 expert-based invertebrate functional groups. The habitat (position in the water column) and potential diet of each group were identified from the literature. Using the MEDITS bottom trawl survey data collected at 10 to 800 m depth, we calculated relative change in the 12 fish and invertebrate functional group biomasses for 12...
Tipo: Text Palavras-chave: Morphological traits; Community models; Functional network; Functional groups; Mediterranean Sea; Temporal trends; Fish; Shellfish.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00363/47382/47475.pdf
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Large-Scale Diversity of Slope Fishes: Pattern Inconsistency between Multiple Diversity Indices ArchiMer
Gaertner, Jean-claude; Maiorano, Porza; Merigot, Bastien; Colloca, Francesco; Politou, Chrissi-yianna; Gil De Sola, Luis; Bertrand, Jacques; Murenu, Matteo; Durbec, Jean-pierre; Kallianiotis, Argyris; Mannini, Alessandro.
Large-scale studies focused on the diversity of continental slope ecosystems are still rare, usually restricted to a limited number of diversity indices and mainly based on the empirical comparison of heterogeneous local data sets. In contrast, we investigate large-scale fish diversity on the basis of multiple diversity indices and using 1454 standardized trawl hauls collected throughout the upper and middle slope of the whole northern Mediterranean Sea (36 degrees 3' - 45 degrees 7' N; 5 degrees 3'W - 28 degrees E). We have analyzed (1) the empirical relationships between a set of 11 diversity indices in order to assess their degree of complementarity/redundancy and (2) the consistency of spatial patterns exhibited by each of the complementary groups of...
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Ano: 2013 URL: http://archimer.ifremer.fr/doc/00152/26299/24392.pdf
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Large-scale spatio-temporal monitoring highlights hotspots of demersal fish diversity in the Mediterranean Sea ArchiMer
Granger, Victoria; Fromentin, Jean-marc; Bez, Nicolas; Relini, Giulio; Meynard, Christine N.; Gaertner, Jean-claude; Maiorano, Porzia; Garcia Ruiz, Cristina; Follesa, Cristina; Gristina, Michele; Peristeraki, Panagiota; Brind'Amour, Anik; Carbonara, Pierluigi; Charilaou, Charis; Esteban, Antonio; Jadaud, Angelique; Joksimovic, Aleksandar; Kallianiotis, Argyris; Kolitari, Jerina; Manfredi, Chiara; Massuti, Enric; Mifsud, Roberta; Quetglas, Antoni; Refes, Wahid; Sbrana, Mario; Vrgoc, Nedo; Spedicato, Maria Teresa; Merigot, Bastien.
Increasing human pressures and global environmental change may severely affect the diversity of species assemblages and associated ecosystem services. Despite the recent interest in phylogenetic and functional diversity, our knowledge on large spatio-temporal patterns of demersal fish diversity sampled by trawling remains still incomplete, notably in the Mediterranean Sea, one of the most threatened marine regions of the world. We investigated large spatio-temporal diversity patterns by analysing a dataset of 19,886 hauls from 10 to 800 m depth performed annually during the last two decades by standardized scientific bottom trawl field surveys across the Mediterranean Sea, within the MEDITS program. A multi-component (eight diversity indices) and...
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Ano: 2015 URL: https://archimer.ifremer.fr/doc/00216/32743/31322.pdf
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Mapping diversity indices: not a trivial issue ArchiMer
Granger, Victoria; Bez, Nicolas; Fromentin, Jean-marc; Meynard, Christine; Jadaud, Angelique; Merigot, Bastien.
Mapping diversity indices, that is estimating values in all locations of a given area from some sampled locations, is central to numerous research and applied fields in ecology. Two approaches are used to map diversity indices without including abiotic or biotic variables: (i) the indirect approach, which consists in estimating each individual species distribution over the area, then stacking the distributions of all species to estimate and map a posteriori the diversity index, (ii) the direct approach, which relies on computing a diversity index in each sampled locations and then to interpolate these values to all locations of the studied area for mapping. For both approaches, we document drawbacks from theoretical and practical viewpoints and argue...
Tipo: Text Palavras-chave: Interpolation methods; Map; Quadratic entropy; Spatial statistics; Species diversity; Species richness; Beta-diversity.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00257/36819/37060.pdf
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Modelling of European hake nurseries in the Mediterranean Sea: an ecological niche approach ArchiMer
Druon, Jean-noel; Fiorentino, Fabio; Murenu, Matteo; Knittweis, Leyla; Colloca, Francesco; Osio, Chato; Merigot, Bastien; Garofalo, Germana; Mannini, Alessandro; Jadaud, Angelique; Sbrana, Mario; Scarcella, Giuseppe; Tserpesi, George; Peristeraki, Panagiota; Carlucci, Roberto; Heikkonen, Jukka.
An ecological niche modelling (ENM) approach was developed to model the suitable habitat 36 for the 0-group European hake, Merluccius merluccius L., 1758, in the Mediterranean Sea. 37 The ENM was built combining knowledge on biological traits of hake recruits (e.g. growth, 38 settlement, mobility and feeding strategy) with patterns of selected ecological variables 39 (chlorophyll-a fronts and concentration, bottom depth, sea bottom current and temperature) 40 to highlight favourable nursery habitats. The results show that hake nurseries require stable 41 bottom temperature (11.8-15.0oC), low bottom currents (< 0.034 m.s-1) and a frequent 42 occurrence of productive fronts in low chlorophyll-a areas (0.1-0.9 mg.m-3) to support a 43 successful...
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Ano: 2015 URL: https://archimer.ifremer.fr/doc/00228/33947/32262.pdf
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Multifaceted biodiversity hotspots of marine mammals for conservation priorities ArchiMer
Albouy, Camille; Delattre, Valentine L.; Merigot, Bastien; Meynard, Christine N.; Leprieur, Fabien.
Aim Identifying the multifaceted biodiversity hotspots for marine mammals and their spatial overlap with human threats at the global scale. Location World-wide. Methods We compiled a functional trait database for 121 species of marine mammals characterized by 14 functional traits grouped into five categories. We estimated marine mammal species richness (SR) as well as functional (FD) and phylogenetic diversity (PD) per grid cell (1° × 1°) using the FRic index (a measure of trait diversity as the volume of functional space occupied by the species present in an assemblage) and the PD index (the amount of evolutionary history represented by a set of species), respectively. Finally, we assessed the spatial congruence of these three facets of biodiversity...
Tipo: Text Palavras-chave: Conservation; Functional diversity; Marine mammals; Phylogenetic diversity.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00385/49662/51084.pdf
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Reproducibility of the multi-component aspect of species diversity across different areas and scales: towards the constitution of a shortlist of complementary indices for monitoring fish diversity? ArchiMer
Gaertner, Jean-claude; Merigot, Bastien; Relini, Giulio; Bertrand, Jacques; Mazouni, Nabila; Politou, Chrissi-yianna; Gil De Sola, Luis; Kallianiotis, Argyris; Carpentieri, Paolo; Murenu, Matteo; Durbec, Jean-pierre; Vrgoc, Nedo; Ungaro, Nicola.
Recent theoretical and field studies conducted in both terrestrial and marine ecosystems have suggested that diversity could be a more complex and multi-component concept than previously thought. However, it is still poorly understood to what extent the information provided by the various indices is complementary with regard to diversity, and to what extent this complementarity is reproducible in different situations or at different scales of observation. In the present work, we have analysed the reproducibility of the empirical relationships between 11 diversity indices related to four major aspects (components) of species diversity (species richness, rarity, evenness and species taxonomy) in order to determine whether there is a general pattern of...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00029/14064/11382.pdf
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Spatio-Temporal Dynamics of Exploited Groundfish Species Assemblages Faced to Environmental and Fishing Forcings: Insights from the Mauritanian Exclusive Economic Zone ArchiMer
Kide, Saikou Oumar; Mante, Claude; Dubroca, Laurent; Demarcq, Herve; Merigot, Bastien.
Environmental changes and human activities can have strong impacts on biodiversity and ecosystem functioning. This study investigates how, from a quantitative point of view, simultaneously both environmental and anthropogenic factors affect species composition and abundance of exploited groundfish assemblages (i.e. target and non-target species) at large spatio-temporal scales. We aim to investigate (1) the spatial and annual stability of groundfish assemblages, (2) relationships between these assemblages and structuring factors in order to better explain the dynamic of the assemblages’ structure. The Mauritanian Exclusive Economic Zone (MEEZ) is of particular interest as it embeds a productive ecosystem due to upwelling, producing abundant and diverse...
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Ano: 2015 URL: https://archimer.ifremer.fr/doc/00288/39945/38493.pdf
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Statistical ecology comes of age ArchiMer
Gimenez, Olivier; Buckland, Stephen T.; Morgan, Byron J. T.; Bez, Nicolas; Bertrand, Sophie; Choquet, Remi; Dray, Stephane; Etienne, Marie-pierre; Fewster, Rachel; Gosselin, Frederic; Merigot, Bastien; Monestiez, Pascal; Morales, Juan M.; Mortier, Frederic; Munoz, Francois; Ovaskainen, Otso; Pavoine, Sandrine; Pradel, Roger; Schurr, Frank M.; Thomas, Len; Thuiller, Wilfried; Trenkel, Verena; De Valpine, Perry; Rexstad, Eric.
The desire to predict the consequences of global environmental change has been the driver towards more realistic models embracing the variability and uncertainties inherent in ecology. Statistical ecology has gelled over the past decade as a discipline that moves away from describing patterns towards modelling the ecological processes that generate these patterns. Following the fourth International Statistical Ecology Conference (1–4 July 2014) in Montpellier, France, we analyse current trends in statistical ecology. Important advances in the analysis of individual movement, and in the modelling of population dynamics and species distributions, are made possible by the increasing use of hierarchical and hidden process models. Exciting research perspectives...
Tipo: Text Palavras-chave: Citizen science; Hidden Markov model; Hierarchical model; Movement ecology; Software package; Spatially explicit capture-recapture; Species distribution modelling; State-space model.
Ano: 2014 URL: https://archimer.ifremer.fr/doc/00249/36026/35298.pdf
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The MEDITS trawl survey specifications in an ecosystem approach to fishery management ArchiMer
Spedicato, Maria Teresa; Massuti, Enric; Merigot, Bastien; Tserpes, George; Jadaud, Angelique; Relini, Giulio.
The MEDITS programme started in 1994 in the Mediterranean with the cooperation among research institutes from four countries: France, Greece, Italy and Spain. Over the years, until the advent of the European framework for the collection and management of fisheries data (the Data Collection Framework. DCF), new partners from Slovenia, Croatia. Albania, Montenegro, Malta and Cyprus joined MEDITS. The FAO regional projects facilitated the cooperation with non-European countries. MEDITS applies a common sampling protocol and methodology for sample collection, data storage and data quality checks (RoME routines). For many years, MEDITS represented the most important data source supporting the evaluation of demersal resources by means of population and community...
Tipo: Text Palavras-chave: Demersal resources; Trawl survey; Sampling; Mediterranean.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00600/71216/69592.pdf
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