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Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil BJM
Melo,Ricardo Rodrigues de; Persinoti,Gabriela Felix; Paixão,Douglas Antonio Alvaredo; Squina,Fábio Márcio; Ruller,Roberto; Sato,Helia Harumi.
ABSTRACT Here, we show the draft genome sequence of Streptomyces sp. F1, a strain isolated from soil with great potential for secretion of hydrolytic enzymes used to deconstruct cellulosic biomass. The draft genome assembly of Streptomyces sp. strain F1 has 69 contigs with a total genome size of 8,142,296 bp and G + C 72.65%. Preliminary genome analysis identified 175 proteins as Carbohydrate-Active Enzymes, being 85 glycoside hydrolases organized in 33 distinct families. This draft genome information provides new insights on the key genes encoding hydrolytic enzymes involved in biomass deconstruction employed by soil bacteria.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Actinobacteria; Glycoside hydrolases; Streptomyces; Draft genome sequence; Soil bacteria.
Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822017000400612
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The genome sequence of Dyella jiangningensis FCAV SCS01 from a lignocellulose-decomposing microbial consortium metagenome reveals potential for biotechnological applications Genet. Mol. Biol.
Desiderato,Joana G.; Alvarenga,Danillo O.; Constancio,Milena T.L.; Alves,Lucia M.C.; Varani,Alessandro M..
Abstract Cellulose and its associated polymers are structural components of the plant cell wall, constituting one of the major sources of carbon and energy in nature. The carbon cycle is dependent on cellulose- and lignin-decomposing microbial communities and their enzymatic systems acting as consortia. These microbial consortia are under constant exploration for their potential biotechnological use. Herein, we describe the characterization of the genome of Dyella jiangningensis FCAV SCS01, recovered from the metagenome of a lignocellulose-degrading microbial consortium, which was isolated from a sugarcane crop soil under mechanical harvesting and covered by decomposing straw. The 4.7 Mbp genome encodes 4,194 proteins, including 36 glycoside hydrolases...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Plant cell wall polysaccharides; Glycoside hydrolases; Genome annotation; Comparative genomics; Rhodanobacteraceae.
Ano: 2018 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572018000300507
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