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A Statistical Algorithm for Estimating Chlorophyll Concentration in the New Caledonian Lagoon ArchiMer
Wattelez, Guillaume; Dupouy, Cecile; Mangeas, Morgan; Lefevre, Jerome; Touraivane,; Frouin, Robert.
Spatial and temporal dynamics of phytoplankton biomass and water turbidity can provide crucial information about the function, health and vulnerability of lagoon ecosystems (coral reefs, sea grasses, etc.). A statistical algorithm is proposed to estimate chlorophyll-a concentration ([chl-a]) in optically complex waters of the New Caledonian lagoon from MODIS-derived remote-sensing reflectance (R-rs). The algorithm is developed via supervised learning on match-ups gathered from 2002 to 2010. The best performance is obtained by combining two models, selected according to the ratio of R-rs in spectral bands centered on 488 and 555 nm: a log-linear model for low [chl-a] (AFLC) and a support vector machine (SVM) model or a classic model (OC3) for high [chl-a]....
Tipo: Text Palavras-chave: Chlorophyll-a concentration; MODerate resolution Imaging Spectroradiometer (MODIS); Ocean color; Remote sensing; Statistical algorithm; Oligotrophic waters; New Caledonia; Coral lagoon.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00481/59309/62060.pdf
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A step toward the definition of ecological indicators of the impact of fishing on the fish assemblage of the Abore reef reserve (New Caledonia) ArchiMer
Amand, Marion; Pelletier, Dominique; Ferrari, Jocelyne; Kulbicki, Michel.
Marine Protected Areas (MPA) are often contemplated as a tool for the sustainable management of exploited resources and ecosystem conservation. This paper proposes an approach to establish a statistical diagnostic of the effects of MPAs on fish assemblages, and define corresponding ecological indicators. This requires choosing relevant variables (abundance, diversity, demographic parameters..) and appropriate statistical methods. The study was based on data from the Abore reef Reserve in New Caledonia. Two sets of methods: 1-inferential linear models (ANOVA, GLM): 2- Partial Least Squares (PLS) methods of regression, were used to test the effects of this MPA. PLS enabled us to test simultaneously within a model, density, species richness, biomass and mean...
Tipo: Text Palavras-chave: New Caledonia; PLS regression; Ecological indicators; Fishing impact; Coral reef; Fish; Marine Protected Areas.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/2004/publication-398.pdf
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A white spot disease-like syndrome in the Pacific blue shrimp (Litopenaeus stylirostris) as a form of bacterial shell disease ArchiMer
Goarant, Cyrille; Brizard, Raphael; Marteau, Anne-laure.
In May 1997, some white lesions evoking the white spot syndrome disease were observed in Litopenaeus stylirostris broodstock in New Caledonia. The occurrence of these lesions was neither associated with mortality, nor with histological evidence of white spot syndrome baculovirus (WSBV), The evidence suggests that these lesions result from a form of bacterial disease and are associated with an increased bacterial flora on the outer surface of the cuticle, as well as an increased incidence throughout the molt cycle. A microscopic observation of these lesions allows them to be differentiated from WSBV-associated lesions.
Tipo: Text Palavras-chave: New Caledonia; White spot syndrome; Aquaculture; Pathogenic bacteria; Shrimp culture; Crustaceans; Diseases; Litopenaeus stylirostris.
Ano: 2000 URL: http://archimer.ifremer.fr/doc/2000/publication-373.pdf
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Analyse des résultats d'une ferme d'élevage de crevettes sur 20 années : SODACAL 1984-2004. "Elasticité" de la capacité de production d'un écosystème bassin crevetticole ArchiMer
Della Patrona, Luc.
SODACAL prawn farm which was set up as a pilot farm for the development of a prawn industry in New Caledonia, saw its production exponentially rise from 1984 to 1992 (to 400 t/year, then experienced a sharp drop in 1993 (250 t/year) which carried on until 1997, and finally rose back to a stabilizing level around 400 t/year until 1999. The study analyses the difficulties observed before and during the drop of production. Among them, mortality outbreaks, other biological perturbations (benthic mat clearing and crab and fish mortality) and focus on the noxious state of the bottom (reduced and smelling sulfide hydrogen). It particularly shows that Syndrome 93 outbreaks could be observed on this farm from 1990. The analysis highlights the particular climatic...
Tipo: Text Palavras-chave: New Caledonia; Zootechny; Climate; Ecosystem; Lethal factor; Mortality; Production; Pond culture; Shrimp culture; Climat; Facteur léthal; Bassin élevage; Zootechnie; Dysfonctionnement; Production; Nouvelle Calédonie; Aquaculture.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/rapport-718.pdf
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Anchimolgus gratus n. sp. (Copepoda: Poecilostomatoida: Anchimolgidae), associated with the scleractinian coral Lithactinia novaehiberniae in New Caledonia Naturalis
Humes, Arthur G..
Anchimolgus gratus n. sp., associated with the fungiid coral Lithactinia novaehiberniae Lesson, 1831 in New Caledonia, is distinguished from its congeners (except A. pandus Humes, 1978) by the formula III,I,5 on the third segment of the exopod of leg 4. The new species differs from A. pandus which is much smaller and in which the female genital double-somite is as long as wide.
Tipo: Article / Letter to the editor Palavras-chave: Copepoda; Poecilostomatoida; Anchimolgus; Associate; Scleractinian coral; New Caledonia.
Ano: 1996 URL: http://www.repository.naturalis.nl/record/503901
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Benefits of swath mapping for the identification of marine habitats in the New Caledonia Economic Zone ArchiMer
Van De Beuque, Sabrina; Auzende, Jean-marie; Lafoy, Yves; Grandperrin, René.
The ZoNeCo programme is devoted to the evaluation of the marine resources of the Economic Zone of New Caledonia. The results are essentially dependent on the quality of the seafloor mapping. From 1993 to 1996, four geological and geophysical surveys using the EM12 DUAL multibeam echosounder provided swath-mapping and acoustic imagery data of the seafloor of selected sites on the northern and southern parts of the Norfolk ridge, the Loyalty basin, around the Loyalty islands and in the westernmost part of the Economic Zone of New Caledonia. The accuracy of these documents shows the morphology of the seafloor in detail and allows rocky substratum to be differentiated from muddy bottom. It allows favorable emplacements of future exploratory fishing surveys to...
Tipo: Text Palavras-chave: Ressources marines; Habitats marins; Cartographie multifaisceaux; Nouvelle Calédonie; Sud Ouest Pacifique; Marine resources; Marine habitats; Swath mapping; New Caledonia; SW Pacific.
Ano: 1999 URL: http://archimer.ifremer.fr/doc/1999/publication-833.pdf
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Cantharellus noumeae (gen. nov., spec. nov.), a new scleractinian coral (Fungiidae) from new Caledonia Naturalis
Hoeksema, B.W.; Borel Best, M..
A new monospecific genus in the coral family Fungiidae (Scleractinia) is described. Its affinities with two other genera are discussed.
Tipo: Article / Letter to the editor Palavras-chave: Scleractinia; Fungiidae; New genus; New species; New Caledonia; 42.72.
Ano: 1984 URL: http://www.repository.naturalis.nl/record/318550
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Circulation and suspended sediment transport in a coral reef lagoon: The south-west lagoon of New Caledonia ArchiMer
Ouillon, S.; Douillet, Pascal; Lefebvre, J. P.; Le Gendre, Romain; Jouon, Aymeric; Bonneton, P.; Fernandez,; Chevillon, C.; Magand, O.; Lefevre, J.; Le Hir, Pierre; Laganier, R.; Dumas, Franck; Marchesiello, P.; Madani, A. Bel; Andrefouet, S.; Panche, J. Y.; Fichez, R..
The south-west lagoon of New Caledonia is a wide semi-open coral reef lagoon bounded by an intertidal barrier reef and bisected by numerous deep inlets. This paper synthesizes findings from the 2000-2008 French National Program EC2CO-PNEC relative to the circulation and the transport of suspended particles in this lagoon. Numerical model development (hydrodynamic, fine suspended sediment transport, wind-wave, small-scale atmospheric circulation) allowed the determination of circulation patterns in the lagoon and the charting of residence time, the later of which has been recently used in a series of ecological studies. Topical studies based on field measurements permitted the parameterisation of wave set-up induced by the swell breaking on the reef barrier...
Tipo: Text Palavras-chave: Hydrodynamics; Suspended sediment; New Caledonia; Coral reef lagoon; Sediment; Turbidity; Resuspension.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00014/12526/9401.pdf
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Concentrations and fractionation of carbon, iron, sulfur, nitrogen and phosphorus in mangrove sediments along an intertidal gradient (semi-arid climate, New Caledonia) ArchiMer
Deborde, Jonathan; Marchand, Cyril; Molnar, Nathalie; Della Patrona, Luc; Meziane, Tarik.
In mangrove ecosystems, strong reciprocal interactions exist between plant and substrate. Under semi-arid climate, Rhizophora spp. are usually predominant, colonizing the seashore, and Avicennia marina develops at the edge of salt-flats, which is the highest zone in the intertidal range. Along this zonation, distribution and speciation of C, Fe, S, N, and P in sediments and pore-waters were investigated. From the land-side to the sea-side of the mangrove, sediments were characterized by I/ increase in: (i) water content; (ii) TOC; (iii) mangrove-derived OM; II/ and decrease in: (i) salinity; (ii) redox; (iii) pH; (iv) solid Fe and solid P. Beneath Avicennia and Rhizophora, TS accumulated at depth, probably as a result of reduction of iron oxides and...
Tipo: Text Palavras-chave: Mangrove; Zonation; Biogeochemistry; New Caledonia.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00251/36252/34802.pdf
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Crustacea Copepoda: <i>Amphicrossus pacificus</i> gen. et sp. nov., an erebonasterid copepod (Poecilostomatoida) from the New Caledonian continental shelf OMA
Huys, R..
A new species of Erebonasteridae, Amphicrossus pacificus, is decribed on the basis of a single female from a depth of 155 m north of New Caledonia in the Grand Passage zone. The new species is closely related to Erebonaster spinulosus Humes and for that reason the latter is transferred to the new genus Amphicrossus. Differences in body ornamentation and armature of maxilla, maxilliped and P4 serve to distinguish Amphicrossus and Erebonaster. Other noticeable discrepancies are found in the structure of the rostrum, the shape of the thoracic epimera and the design of the fifth pair of legs. A peculiar structure, the "sensory area", is shown on the posterior surface of enp-2 P2 in both Amphicrossus species which can be differentiated from each other on the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: New genera New species ISEW; New Caledonia.
Ano: 1991 URL: http://www.vliz.be/imisdocs/publications/266847.pdf
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Decadal increase in the number of recreational users is concentrated in no-take marine reserves ArchiMer
Gonson, Charles; Pelletier, Dominique; Gamp, Elodie; Preuss, Bastien; Jollit, Isabelle; Ferraris, Jocelyne.
In coastal areas, demographic increase is likely to result in greater numbers of recreational users, with potential consequences on marine biodiversity. These effects may also occur within Marine Protected Areas (MPAs), which are popular with recreational users. Our analysis builds on data collected over a ten-year period during three year-round surveys to appraise changes in recreational boating activities in coral ecosystems. Results show that the number of boaters has greatly increased, particularly so within MPAs during weekends and the warm season, when peaks in boat numbers have become more frequent. We also observed that the number of anchored boats has increased over the period. These changes may be resulting in biophysical impacts that could be...
Tipo: Text Palavras-chave: Recreational uses; MPA; Coral reef ecosystem; Spatio-temporal pattern; New Caledonia; Mooring practices.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00327/43776/44014.pdf
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Des systèmes vidéo rotatifs pour étudier l'ichtyofaune : Applications à l’analyse des variations spatiales et temporelles dans le lagon de Nouvelle-Calédonie ArchiMer
Mallet, Delphine.
Estimating diversity and abundance of fish is fundamental for the understanding of community structure and dynamics of coral reefs. Observations are generally gathered using Underwater Visual Census (UVC). These informations can also be collected by underwater video techniques involving no diver and allowing a high spatial and temporal coverage. The first part of this PhD thesis is a review of publications using underwater video techniques between 1952 and 2012. The second part present two rotating video systems used to study the diversity of ichthyofauna and habitats in the lagoon of New Caledonia: the STAVIRO (for "STAtion VIdeo ROtative") and the MICADO (for "Module d’Imagerie Côtier, Autonome pour le Développement de l’Observation sous-marine"). The...
Tipo: Text Palavras-chave: Vidéo sous-marine; Systèmes d’observation; Poissons coralliens; Nouvelle-Calédonie; Underwater video; Observation systems; Coral reef fish; New Caledonia.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00189/30050/28536.pdf
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Development patterns of fringing and barrier reefs in New Caledonia (southwest Pacific) ArchiMer
Cabioch, G; Correge, T; Turpin, L; Castellaro, C; Recy, J.
In New Caledonia, core data indicate that the fringing reefs grew during the last interglacial and the Holocene, while the barrier reefs developed during several high sea level stands of the Quaternary. These growth periods are archived in a 128-m-long core from Ilot Amedee, offshore of Noumea. Directly upon the peridotitic substrate (reached at 126.50 m), a basal unit comprising abundant rhodoliths, molluscs and rare corals is characteristic of the pioneer stage of barrier reef development. Above it, a severely calcitized unit contains corals, molluscs and abundant micritic levels. Then, a sequence punctuated by several minor discontinuities and by a downward increase in diagenetic alteration is found. At 47 m core depth, a unit, which is thought to be...
Tipo: Text Palavras-chave: Croissance récifale; Néotectonique; Nouvelle-Calédonie; Quaternaire; Reef growth; Neotectonics; New Caledonia; Quaternary.
Ano: 1999 URL: http://archimer.ifremer.fr/doc/00325/43582/44021.pdf
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Diazotrophs: a non-negligible source of nitrogen for the tropical coral Stylophora pistillata ArchiMer
Benavides, Mar; Houlbreque, Fanny; Camps, Mercedes; Lorrain, Anne; Grosso, Olivier; Bonnet, Sophie.
Corals aremixotrophs: they are able to fix inorganic carbon through the activity of their symbiotic dinoflagellates and to gain nitrogen from predation on plankton and uptake of dissolved organic and inorganic nutrients. They also live in close association with diverse diazotrophic communities, inhabiting their skeleton, tissue and mucus layer, which are able to fix dinitrogen (N-2). The quantity of fixed N-2 transferred to the corals and its distribution within coral compartments as well as the quantity of nitrogen assimilated through the ingestion of planktonic diazotrophs are still unknown. Here, we quantified nitrogen assimilation via (i) N-2 fixation by symbiont diazotrophs, (ii) ingestion of cultured unicellular diazotrophs and (iii) ingestion of...
Tipo: Text Palavras-chave: Scleractinian corals; Heterotrophic nutrition; Cyanothece; N-2 fixation; New Caledonia.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00356/46678/72967.pdf
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Effect of water exchange on effluent and sediment characteristics and on partial nitrogen budget in semi-intensive shrimp ponds in New Caledonia ArchiMer
Lemonnier, Hugues; Faninoz, Sebastien.
An experiment was conducted in six earthen ponds with 20 shrimps m(-2) Litopenaeus stylirostris (Stimpson) during the warm season in New Caledonia to study the dynamics of wastes in relation with water exchange rate (WER). The nitrogen budget was established, taking into account the different forms of nitrogen in the water, sediment, feed and shrimp. Data from a wide range of treatments applied in unreplicated ponds were treated using regression analysis to establish the relationship between WER and partial nitrogen budget, sediment characteristics and shrimp performance. To compare effluent quality between treatments during the season, data were analysed using the non-parametric sign test. The water outflow was characterized by a decrease in the...
Tipo: Text Palavras-chave: New Caledonia; Nitrogen; Water exchange; Shrimp; Sediment quality; Effluent.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-1811.pdf
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Effet des conditions environnementales sur le développement des pathologies à Vibrio dans les élevages de crevettes en Nouvelle-Calédonie ArchiMer
Lemonnier, Hugues.
Shrimp aquaculture in New Caledonia is a developing industry, exclusively based on the species Litopenaeus stylirostris. However, it is subject to mortalities during grow out as observed all over the world. Since 1993, shrimp reared during the cold period are affected by a disease named "syndrome 93". As a consequence, the whole industry has become seasonal and produces essentially during the warm season. The climatic conditions during the periods of transition between the two main seasons could be responsible for an environmental stress and the origin reason for mortality outbreaks. Stocking density is the main risk factor. It increases the probability of the appearance and development of the epizooty in the pond. The "Summer Syndrome", a septicemic...
Tipo: Text Palavras-chave: New Caledonia; Risk factors; Environmental stress; Vibriosis; Epizooty; Pond management; Eutrophication; Pond health; Shrimp; Litopenaeus stylirostris; Peneids; Aquaculture; Nouvelle Calédonie; Facteur de risque; Stress environnemental; Vibrioses; Pratiques d'élevage; Eutrophisation; Santé de l'écosystème bassin; Crevette; Litopenaeus stylirostris; Pénéides; Aquacultre.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/these-2643.pdf
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Estimation des stocks de poisson des lagons de Nouvelle-Calédonie : 1 – Structure et stocks des communautés des poissons de récifs. ArchiMer
Letourneur, Y; Kulbicki, M; Labrosse, Pierre.
Lagoon fish in New Caledonia are mainly caught by artisanal fisheries and subsistence fishing. Reef fish are the major component of this catch. The present study aimed at estimating these reef fish standing stocks and at finding the main factors influencing the distribution of these fish. Sampling of 904 stations was stratified according to three zones (north, east and west) and three reef types (barrier, intermediate and fringing). Fish communities exhibited strong heterogeneity in their distribution, showing higher biomass (maximum of 447 g.m(-2)) and total standing stock (43 000 tonnes) in the north zone than in the east and west zones. Similarly, observed patterns were dependent on reef types: higher biomass and total standing stock being observed on...
Tipo: Text Palavras-chave: Poissons de récifs; Poissons démersaux commerciaux; Structure de population; Nouvelle-Calédonie; Océan Pacifique; Reef fish; Commercial demersal fish; Population structure; New Caledonia; SW Pacific Ocean.
Ano: 2000 URL: https://archimer.ifremer.fr/doc/00608/71968/70658.pdf
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Estimation des stocks de poissons des lagons de Nouvelle-Calédonie : 3 – Pression de pêche, rendements potentiels et impact sur les options d’aménagement ArchiMer
Labrosse, Pierre; Letourneur, Y; Kulbicki, M; Paddon, Jr.
The potential yields of demersal reefal and lagoonal finfish, which are valuable for trade or consumption in the Northern Province of New Caledonia, are unknown. Fishing pressure was estimated from tally-sheets of professional fishermen to assess trade fishing and a household consumption survey to assess subsistence fishing. Total yield was estimated to be 1 326 tonnes in 1995, 94 % of which correspond to subsistence fishing. Most of the catches were taken from the east and west coasts; in the north zone (Belep Archipelago) catches were very low. From this fishing pressure and the total stock values, the maximum sustainable yield (MSY) was estimated to be 12 600 t, which was about 10 % of the total stocks assessed in the Northern Province (138 300 t). This...
Tipo: Text Palavras-chave: Pêcheries lagonaires; Captures; Prises maximales soutenues; Pêche de subsistance; Nouvelle-Calédonie; Océan Pacifique; Lagoon fisheries; Fishery resources; Current yields; Maximum sustainable yields; Subsistence fishing; New Caledonia; Pacific Ocean.
Ano: 2000 URL: https://archimer.ifremer.fr/doc/00608/71970/70660.pdf
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Etat de santé des habitats et peuplements de poissons des atolls d’Entrecasteaux, zone inscrite au Patrimoine Mondial de l’Humanité et Parc naturel de la mer de Corail. Evaluation initiale par stations vidéo rotatives STAVIRO ArchiMer
Schohn, Thomas; Pelletier, Dominique; Carpentier, Liliane.
The AMBIO project conducted a comprehensive video-based baseline assessment of coral reef fish communities and associated habitats in the New Caledonian lagoons. Observation relies on remote unbaited underwater video, using the STAVIRO rotating technique (Pelletier et al. 2012).  This survey was conducted in 2015 in Entrecasteaux Reefs, both located within the Coral Sea Natural Park, and part of World Heritage site. 109 STAVIRO were validated in 9 days, covering the reefs and geomorphological units in the area. Images were analyzed to characterize the habitat surrounding each station, and fishes based on a list of 565 species (Pelletier et al. 2016).  28 indicators were computed and represented on maps (Sextant server). Indicators were analyzed using the...
Tipo: Text Palavras-chave: Biodiversité; Ichtyofaune; Habitat; Vidéo sous-marine; STAVIRO; Evaluation; Suivi; Aire Marine Protégée; Patrimoine mondial; Parc de la mer de Corail; Ecosystème corallien; Nouvelle-Calédonie; Indicateur; Tableau de bord; Cartes; Sextant; PAMPA; Biodiversity; Fish; Habitat; Underwater video; STAVIRO; Monitoring and assessment; Marine Protected Area: Coral Sea Natural Park; World Heritage; Coral reefs; New Caledonia; Indicator; Dashboard; Map; Sextant; PAMPA.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00406/51760/52357.pdf
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Etat de santé des habitats et peuplements de poissons des îles et récifs de l’Astrolabe, Pétrie et Walpole, Parc Naturel de la Mer de Corail. Evaluation initiale par stations vidéo rotatives STAVIRO ArchiMer
Schohn, Thomas; Bockel, Thomas; Carpentier, Liliane; Pelletier, Dominique.
- The AMBIO project conducted a comprehensive video-based baseline assessment of coral reef fish communities and associated habitats in the New Caledonian lagoons. The survey relies on remote unbaited underwater video observations, using the STAVIRO rotating technique. - The study pertains to the reefs of Astrolabe, Pétrie and Walpole Island, located within the Coral Sea Natural Park. The survey conducted in 2014 covers the entire area, and the sampling design was stratified according to reef type. 95 stations were validated. They were analyzed to characterize the habitat surrounding each station, and fish communities, based on a list of 565 fish species (cf. AMBIO/A/1). - 28 indicators were computed and mapped (maps available on a Sextant server)....
Tipo: Text Palavras-chave: Biodiversité; Ichtyofaune; Habitat; Vidéo sous-marine; STAVIRO; Evaluation; Suivi; Parc naturel mer de Corail; Nouvelle-Calédonie; Indicateur; Tableau de bord; Serveur de cartes; Sextant; PAMPA; Ecosystème corallien; Biodiversity; Fish; Habitat; Underwater video; STAVIRO; Monitoring and assessment; Marine Protected Area: Coral Sea Natural Park; Coral reefs; New Caledonia; Indicator; Dashboard; Map server; Sextant; PAMPA.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00406/51738/52324.pdf
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